STRINGSTRING
gdf11 gdf11 nf1 nf1 CCN3 CCN3 LOC103480354 LOC103480354 LOC103481601 LOC103481601 ddit3 ddit3 akirin1 akirin1 itgb1bp1 itgb1bp1 LOC103476977 LOC103476977 plat plat plekho1 plekho1 aamp aamp smo smo VANGL2 VANGL2 bin3 bin3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gdf11Growth differentiation factor 11. (388 aa)
nf1Neurofibromin 1b. (2742 aa)
CCN3Cellular communication network factor 3. (349 aa)
LOC103480354Vang-like protein. (525 aa)
LOC103481601Uncharacterized protein. (467 aa)
ddit3DNA-damage-inducible transcript 3. (309 aa)
akirin1Akirin 1. (186 aa)
itgb1bp1Integrin beta 1 binding protein 1. (193 aa)
LOC103476977Uncharacterized protein; Belongs to the peptidase S1 family. (399 aa)
platPlasminogen activator, tissue. (581 aa)
plekho1Pleckstrin homology domain containing, family O member 1a. (660 aa)
aampAngio-associated, migratory cell protein. (434 aa)
smoSmoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (811 aa)
VANGL2VANGL planar cell polarity protein 2. (691 aa)
bin3Bridging integrator 3. (248 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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