STRINGSTRING
LOC103470329 LOC103470329 pink1 pink1 slc6a4 slc6a4 p2rx1 p2rx1 slc6a3 slc6a3 mecp2 mecp2 ENSPREP00000020277 ENSPREP00000020277 pick1 pick1 LOC103457235 LOC103457235 LOC103457233 LOC103457233 SLC18A1 SLC18A1 ENSPREP00000026998 ENSPREP00000026998 slc18a2 slc18a2 vip vip slc6a2 slc6a2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103470329Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (568 aa)
pink1PTEN induced kinase 1. (575 aa)
slc6a4Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (714 aa)
p2rx1P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. (421 aa)
slc6a3Solute carrier family 6 member 3. (602 aa)
mecp2Methyl CpG binding protein 2. (982 aa)
ENSPREP00000020277RBR-type E3 ubiquitin transferase. (158 aa)
pick1Protein interacting with prkca 1. (409 aa)
LOC103457235Solute carrier family 22 member 2. (557 aa)
LOC103457233Solute carrier family 22 member 2. (557 aa)
SLC18A1Solute carrier family 18 member A1. (363 aa)
ENSPREP00000026998Solute carrier family 29 member 4. (429 aa)
slc18a2Solute carrier family 18 member 2. (517 aa)
vipVasoactive intestinal peptide. (184 aa)
slc6a2Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (700 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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