21 items (Poecilia reticulata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	plxna2	Sema domain-containing protein. (1911 aa)
	plxna1	Sema domain-containing protein. (1891 aa)
	LOC103466867	Plexin A1a. (1881 aa)
	LOC103466876	Plexin b1a. (2172 aa)
	ENSPREP00000003007	Plexin_cytopl domain-containing protein. (255 aa)
	met	MET proto-oncogene, receptor tyrosine kinase. (1439 aa)
	plxna4	Plexin A4. (1914 aa)
	LOC103464537	Macrophage stimulating 1 receptor a. (1374 aa)
	nrp1	Neuropilin; Belongs to the neuropilin family. (903 aa)
	ENSPREP00000019059	Sema domain-containing protein. (485 aa)
	ENSPREP00000020773	Sema domain-containing protein. (427 aa)
	ENSPREP00000023056	Plexin_cytopl domain-containing protein. (53 aa)
	Plxnd1	Sema domain-containing protein. (627 aa)
	LOC103461156	Plexin_cytopl domain-containing protein. (238 aa)
	LOC103460449	Neuropilin; Belongs to the neuropilin family. (936 aa)
	ENSPREP00000023646	Plexin_cytopl domain-containing protein. (267 aa)
	plxnb2	Plexin b2b. (1848 aa)
	LOC103465508	Plexin b1b. (2191 aa)
	mst1r	Macrophage stimulating 1 receptor b. (1374 aa)
	PLXNB2	Plexin B2. (1772 aa)
	LOC103467959	Plexin A2. (1163 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000003007	ENSPREP00000019059	ENSPREP00000003007	ENSPREP00000019059	Plexin_cytopl domain-containing protein.	Sema domain-containing protein.	0.912
ENSPREP00000003007	ENSPREP00000020773	ENSPREP00000003007	ENSPREP00000020773	Plexin_cytopl domain-containing protein.	Sema domain-containing protein.	0.900
ENSPREP00000003007	LOC103467959	ENSPREP00000003007	ENSPREP00000033140	Plexin_cytopl domain-containing protein.	Plexin A2.	0.899
ENSPREP00000003007	Plxnd1	ENSPREP00000003007	ENSPREP00000023108	Plexin_cytopl domain-containing protein.	Sema domain-containing protein.	0.880
ENSPREP00000003007	nrp1	ENSPREP00000003007	ENSPREP00000008824	Plexin_cytopl domain-containing protein.	Neuropilin; Belongs to the neuropilin family.	0.678
ENSPREP00000019059	ENSPREP00000003007	ENSPREP00000019059	ENSPREP00000003007	Sema domain-containing protein.	Plexin_cytopl domain-containing protein.	0.912
ENSPREP00000019059	ENSPREP00000023646	ENSPREP00000019059	ENSPREP00000023646	Sema domain-containing protein.	Plexin_cytopl domain-containing protein.	0.769
ENSPREP00000019059	LOC103461156	ENSPREP00000019059	ENSPREP00000023186	Sema domain-containing protein.	Plexin_cytopl domain-containing protein.	0.912
ENSPREP00000019059	LOC103464537	ENSPREP00000019059	ENSPREP00000005623	Sema domain-containing protein.	Macrophage stimulating 1 receptor a.	0.518
ENSPREP00000019059	met	ENSPREP00000019059	ENSPREP00000003866	Sema domain-containing protein.	MET proto-oncogene, receptor tyrosine kinase.	0.518
ENSPREP00000019059	mst1r	ENSPREP00000019059	ENSPREP00000031908	Sema domain-containing protein.	Macrophage stimulating 1 receptor b.	0.518
ENSPREP00000019059	nrp1	ENSPREP00000019059	ENSPREP00000008824	Sema domain-containing protein.	Neuropilin; Belongs to the neuropilin family.	0.636
ENSPREP00000020773	ENSPREP00000003007	ENSPREP00000020773	ENSPREP00000003007	Sema domain-containing protein.	Plexin_cytopl domain-containing protein.	0.900
ENSPREP00000020773	ENSPREP00000023646	ENSPREP00000020773	ENSPREP00000023646	Sema domain-containing protein.	Plexin_cytopl domain-containing protein.	0.899
ENSPREP00000020773	LOC103461156	ENSPREP00000020773	ENSPREP00000023186	Sema domain-containing protein.	Plexin_cytopl domain-containing protein.	0.900
ENSPREP00000020773	LOC103467959	ENSPREP00000020773	ENSPREP00000033140	Sema domain-containing protein.	Plexin A2.	0.919
ENSPREP00000020773	nrp1	ENSPREP00000020773	ENSPREP00000008824	Sema domain-containing protein.	Neuropilin; Belongs to the neuropilin family.	0.636
ENSPREP00000023056	nrp1	ENSPREP00000023056	ENSPREP00000008824	Plexin_cytopl domain-containing protein.	Neuropilin; Belongs to the neuropilin family.	0.636
ENSPREP00000023646	ENSPREP00000019059	ENSPREP00000023646	ENSPREP00000019059	Plexin_cytopl domain-containing protein.	Sema domain-containing protein.	0.769
ENSPREP00000023646	ENSPREP00000020773	ENSPREP00000023646	ENSPREP00000020773	Plexin_cytopl domain-containing protein.	Sema domain-containing protein.	0.899