STRINGSTRING
ttll1 ttll1 smo smo LOC103461327 LOC103461327 ttc21b ttc21b ENSPREP00000011364 ENSPREP00000011364 cdk5 cdk5 LOC103474848 LOC103474848 LOC103474919 LOC103474919 lhx1 lhx1 LOC103461154 LOC103461154 LOC103469622 LOC103469622 wdr73 wdr73 agtpbp1 agtpbp1 trnp1 trnp1 whrn whrn ENSPREP00000001616 ENSPREP00000001616 Kndc1 Kndc1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ttll1Tubulin tyrosine ligase-like family, member 1. (424 aa)
smoSmoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (811 aa)
LOC103461327Uncharacterized protein. (406 aa)
ttc21bTetratricopeptide repeat domain 21B. (1317 aa)
ENSPREP00000011364Kinesin family member 14; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1074 aa)
cdk5Cyclin-dependent kinase 5. (262 aa)
LOC103474848Coenzyme Q8B. (649 aa)
LOC103474919Serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2; Belongs to the serpin family. (762 aa)
lhx1LIM homeobox 1a. (374 aa)
LOC103461154RNA binding motif protein 7. (262 aa)
LOC103469622Whirlin b. (978 aa)
wdr73WD repeat domain 73. (375 aa)
agtpbp1ATP/GTP binding protein 1. (1264 aa)
trnp1Si:ch211-160f23.7. (200 aa)
whrnWhirlin a. (828 aa)
ENSPREP00000001616LIM zinc-binding domain-containing protein. (57 aa)
Kndc1Uncharacterized protein. (592 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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