STRINGSTRING
LOC103475931 LOC103475931 LOC103456513 LOC103456513 emx2 emx2 pgap1 pgap1 LOC103482193 LOC103482193 Six3 Six3 LOC103481539 LOC103481539 ttc21b ttc21b axin1 axin1 LOC103471473 LOC103471473 lhx1 lhx1 six6 six6 gsx2 gsx2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103475931SIX homeobox 7. (260 aa)
LOC103456513Uncharacterized protein. (883 aa)
emx2Empty spiracles homeobox 2. (247 aa)
pgap1Post-GPI attachment to proteins 1. (931 aa)
LOC103482193Cytochrome P450, family 26, subfamily A, polypeptide 1; Belongs to the cytochrome P450 family. (506 aa)
Six3SIX homeobox 3a. (341 aa)
LOC103481539SIX homeobox 3b. (277 aa)
ttc21bTetratricopeptide repeat domain 21B. (1317 aa)
axin1Axin 1. (850 aa)
LOC103471473Empty spiracles homeobox 3. (246 aa)
lhx1LIM homeobox 1a. (374 aa)
six6SIX homeobox 6a. (245 aa)
gsx2GS homeobox 2. (239 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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