STRINGSTRING
tsc1 tsc1 sun2 sun2 BMERB1 BMERB1 LOC103464964 LOC103464964 bbs1 bbs1 LOC103470370 LOC103470370 emx2 emx2 foxg1 foxg1 LOC103477205 LOC103477205 smo smo LOC103474746 LOC103474746 LOC103472121 LOC103472121 kdm1a kdm1a xab2 xab2 efhc1 efhc1 fat4 fat4 bbs4 bbs4 crkl crkl LOC103477235 LOC103477235 mkks mkks ENSPREP00000011364 ENSPREP00000011364 cdk5 cdk5 tbr1 tbr1 ENSPREP00000012400 ENSPREP00000012400 mpp5 mpp5 LOC103473007 LOC103473007 BAX BAX LOC103457369 LOC103457369 ENSPREP00000013704 ENSPREP00000013704 crk crk LOC103460864 LOC103460864 LOC103468291 LOC103468291 htr6 htr6 ENSPREP00000017735 ENSPREP00000017735 LOC103477376 LOC103477376 cdk5r1 cdk5r1 ENSPREP00000019614 ENSPREP00000019614 nf1 nf1 LOC103471473 LOC103471473 trappc9 trappc9 ENSPREP00000022311 ENSPREP00000022311 ENSPREP00000023272 ENSPREP00000023272 ENSPREP00000023825 ENSPREP00000023825 RELN RELN ccdc85c ccdc85c LOC103472663 LOC103472663 ENSPREP00000027668 ENSPREP00000027668 Cep120 Cep120 nars1 nars1 AKIRIN2 AKIRIN2 mcph1 mcph1 dcx dcx
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tsc1TSC complex subunit 1b. (1243 aa)
sun2SUN domain-containing protein. (647 aa)
BMERB1BMERB domain containing 1. (197 aa)
LOC103464964Transforming, acidic coiled-coil containing protein 1. (927 aa)
bbs1Bardet-Biedl syndrome 1. (583 aa)
LOC103470370TACC_C domain-containing protein. (503 aa)
emx2Empty spiracles homeobox 2. (247 aa)
foxg1Forkhead box G1a. (346 aa)
LOC103477205TACC_C domain-containing protein. (3266 aa)
smoSmoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family. (811 aa)
LOC103474746Fork-head domain-containing protein. (389 aa)
LOC103472121BTB (POZ) domain containing 3a. (410 aa)
kdm1aLysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (855 aa)
xab2XPA binding protein 2. (912 aa)
efhc1EF-hand domain (C-terminal) containing 1. (551 aa)
fat4FAT atypical cadherin 4. (4974 aa)
bbs4Bardet-Biedl syndrome 4. (520 aa)
crklV-crk avian sarcoma virus CT10 oncogene homolog-like. (310 aa)
LOC103477235BTB (POZ) domain containing 3b. (523 aa)
mkksMcKusick-Kaufman syndrome. (576 aa)
ENSPREP00000011364Kinesin family member 14; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1074 aa)
cdk5Cyclin-dependent kinase 5. (262 aa)
tbr1T-box brain transcription factor 1b. (678 aa)
ENSPREP00000012400Uncharacterized protein. (550 aa)
mpp5Membrane protein, palmitoylated 5b (MAGUK p55 subfamily member 5); Belongs to the MAGUK family. (650 aa)
LOC103473007Cyclin-dependent kinase 5 activator. (321 aa)
BAXBCL2 associated X, apoptosis regulator. (191 aa)
LOC103457369Akirin 2. (179 aa)
ENSPREP00000013704Uncharacterized protein. (155 aa)
crkCRK proto-oncogene, adaptor protein. (315 aa)
LOC103460864Uncharacterized protein; Belongs to the MAGUK family. (538 aa)
LOC103468291Cyclin-dependent kinase 5 activator. (334 aa)
htr65-hydroxytryptamine (serotonin) receptor 6; Belongs to the G-protein coupled receptor 1 family. (468 aa)
ENSPREP00000017735Uncharacterized protein. (748 aa)
LOC103477376Forkhead box G1d. (344 aa)
cdk5r1Cyclin-dependent kinase 5 activator. (450 aa)
ENSPREP00000019614Uncharacterized protein. (181 aa)
nf1Neurofibromin 1b. (2742 aa)
LOC103471473Empty spiracles homeobox 3. (246 aa)
trappc9Trafficking protein particle complex 9. (1092 aa)
ENSPREP00000022311Transforming, acidic coiled-coil containing protein 3. (781 aa)
ENSPREP00000023272Uncharacterized protein. (267 aa)
ENSPREP00000023825SH2 domain-containing protein. (93 aa)
RELNReelin. (3446 aa)
ccdc85cCoiled-coil domain containing 85C. (401 aa)
LOC103472663Eomesodermin homolog a. (651 aa)
ENSPREP00000027668Centrosomal protein 120. (452 aa)
Cep120DUF3668 domain-containing protein. (223 aa)
nars1Asparaginyl-tRNA synthetase. (559 aa)
AKIRIN2Akirin 2. (193 aa)
mcph1Microcephalin 1. (808 aa)
dcxUncharacterized protein. (359 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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