STRINGSTRING
cspg5 cspg5 LOC103456761 LOC103456761 LOC103473322 LOC103473322 LOC103469607 LOC103469607 LOC103479802 LOC103479802 ENSPREP00000020034 ENSPREP00000020034 Neurog1 Neurog1 ENSPREP00000010244 ENSPREP00000010244 gap43 gap43 ascl1 ascl1 Mycbp2 Mycbp2 LOC103472278 LOC103472278 mtr mtr ENSPREP00000002835 ENSPREP00000002835
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cspg5Chondroitin sulfate proteoglycan 5a. (605 aa)
LOC103456761Apolipoprotein Db; Belongs to the calycin superfamily. Lipocalin family. (182 aa)
LOC103473322Zmp:0000000846. (1739 aa)
LOC103469607Tenascin C. (1710 aa)
LOC103479802Apolipoprotein Da, duplicate 1; Belongs to the calycin superfamily. Lipocalin family. (186 aa)
ENSPREP00000020034JunE proto-oncogene, AP-1 transcription factor subunit. (310 aa)
Neurog1Neurogenin 1. (202 aa)
ENSPREP00000010244Uncharacterized protein. (446 aa)
gap43Growth associated protein 43. (237 aa)
ascl1Achaete-scute family bHLH transcription factor 1a. (200 aa)
Mycbp2RING-type domain-containing protein. (497 aa)
LOC103472278Chondroitin sulfate proteoglycan 5b. (651 aa)
mtrMethionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. (1275 aa)
ENSPREP00000002835Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family. (282 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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