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cdc73 cdc73 CPSF7 CPSF7 polr2d polr2d cstf1 cstf1 tut1 tut1 lsm11 lsm11 LOC103472678 LOC103472678 rprd1b rprd1b cpsf4 cpsf4 clp1 clp1 rprd2 rprd2 Rprd2 Rprd2 cpsf1 cpsf1 LOC103457156 LOC103457156 cstf3 cstf3 mtpap mtpap ENSPREP00000018529 ENSPREP00000018529 cstf2 cstf2 papolg papolg lsm10 lsm10 tmem240 tmem240 cpsf2 cpsf2 zc3h3 zc3h3 sympk sympk LOC103472340 LOC103472340 ssu72 ssu72 ENSPREP00000007025 ENSPREP00000007025 slbp slbp CPSF3 CPSF3 cpsf6 cpsf6 aplp1 aplp1 mblac1 mblac1 PNPT1 PNPT1 tent2 tent2 Pcf11 Pcf11 ENSPREP00000001871 ENSPREP00000001871 nudt21 nudt21 WDR33 WDR33
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cdc73Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (576 aa)
CPSF7Cleavage and polyadenylation specific factor 7. (451 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (104 aa)
cstf1Cleavage stimulation factor, 3' pre-RNA, subunit 1. (431 aa)
tut1Terminal uridylyl transferase 1, U6 snRNA-specific. (777 aa)
lsm11LSM11, U7 small nuclear RNA associated. (339 aa)
LOC103472678Regulation of nuclear pre-mRNA domain containing 2a. (1089 aa)
rprd1bRegulation of nuclear pre-mRNA domain containing 1B. (328 aa)
cpsf4Cleavage and polyadenylation specific factor 4. (262 aa)
clp1Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...] (441 aa)
rprd2Regulation of nuclear pre-mRNA domain containing 2b. (1102 aa)
Rprd2CID domain-containing protein. (67 aa)
cpsf1Cleavage and polyadenylation specific factor 1. (1471 aa)
LOC103457156Cleavage and polyadenylation specific factor 3. (627 aa)
cstf3Cleavage stimulation factor, 3' pre-RNA, subunit 3. (716 aa)
mtpapMitochondrial poly(A) polymerase. (583 aa)
ENSPREP00000018529FIP1 like 1b (S. cerevisiae). (435 aa)
cstf2Cleavage stimulation factor, 3' pre-RNA, subunit 2. (556 aa)
papolgPoly(A) polymerase gamma. (847 aa)
lsm10LSM10, U7 small nuclear RNA associated. (131 aa)
tmem240Transmembrane protein 240a. (175 aa)
cpsf2Cleavage and polyadenylation specificity factor subunit 2. (787 aa)
zc3h3Zinc finger CCCH-type containing 3. (890 aa)
sympkSymplekin. (1220 aa)
LOC103472340Regulation of nuclear pre-mRNA domain containing 1A. (273 aa)
ssu72SSU72 homolog, RNA polymerase II CTD phosphatase. (194 aa)
ENSPREP00000007025Uncharacterized protein. (263 aa)
slbpStem-loop binding protein. (270 aa)
CPSF3Cleavage and polyadenylation specific factor 3. (653 aa)
cpsf6Cleavage and polyadenylation specific factor 6. (586 aa)
aplp1Amyloid beta (A4) precursor-like protein 1. (712 aa)
mblac1Metallo-beta-lactamase domain containing 1. (216 aa)
PNPT1Polyribonucleotide nucleotidyltransferase 1. (728 aa)
tent2Terminal nucleotidyltransferase 2. (395 aa)
Pcf11CID domain-containing protein. (87 aa)
ENSPREP00000001871SLBP_RNA_bind domain-containing protein. (251 aa)
nudt21Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (229 aa)
WDR33WD repeat domain 33. (893 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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