STRINGSTRING
lamp3 lamp3 marchf1 marchf1 Litaf Litaf ENSPREP00000000182 ENSPREP00000000182 vps37a vps37a mvb12a mvb12a LOC103465719 LOC103465719 ENSPREP00000000543 ENSPREP00000000543 LOC108166155 LOC108166155 ENSPREP00000001090 ENSPREP00000001090 LOC103469312 LOC103469312 vti1a vti1a LOC103477692 LOC103477692 NSG1 NSG1 ENSPREP00000001350 ENSPREP00000001350 rab27a rab27a LOC103468028 LOC103468028 slc39a14 slc39a14 LOC103468818 LOC103468818 vps4a vps4a hgs hgs LOC103464530 LOC103464530 ENSPREP00000006128 ENSPREP00000006128 VPS4B VPS4B LOC103480104 LOC103480104 LOC103458696 LOC103458696 LOC103468098 LOC103468098 ubxn6 ubxn6 anxa6 anxa6 atg9a atg9a nsg2 nsg2 vps41 vps41 lamtor4 lamtor4 vps28 vps28 snx16 snx16 LOC103469909 LOC103469909 pip4p2 pip4p2 cdip1 cdip1 LOC103468700 LOC103468700 atg9b atg9b yipf2 yipf2 chmp4c chmp4c vps39 vps39 slc30a4 slc30a4 vps33a vps33a ENSPREP00000012632 ENSPREP00000012632 mitd1 mitd1 gosr2 gosr2 vti1b vti1b LOC103462826 LOC103462826 LOC103480138 LOC103480138 LOC103467077 LOC103467077 rmc1 rmc1 abcb6 abcb6 wdr81 wdr81 ap5m1 ap5m1 vps16 vps16 stard3 stard3 LOC103469428 LOC103469428 plekhm1 plekhm1 LOC103470619 LOC103470619 lamtor3 lamtor3 yipf1 yipf1 tmem59 tmem59 mvb12b mvb12b ENSPREP00000017474 ENSPREP00000017474 lamp2 lamp2 RAB7A RAB7A slc38a9 slc38a9 ENSPREP00000018366 ENSPREP00000018366 LOC103471929 LOC103471929 chmp2b chmp2b chmp2a chmp2a LOC103467156 LOC103467156 wdr91 wdr91 vps18 vps18 vps11 vps11 lamtor5 lamtor5 LOC103476297 LOC103476297 vps36 vps36 chmp3 chmp3 LOC103469560 LOC103469560 chmp6 chmp6 ENSPREP00000022284 ENSPREP00000022284 vps37b vps37b kidins220 kidins220 LOC103469543 LOC103469543 ENSPREP00000022754 ENSPREP00000022754 ENSPREP00000022805 ENSPREP00000022805 abhd6 abhd6 LOC103460482 LOC103460482 sorl1 sorl1 LAMP5 LAMP5 LOC103467226 LOC103467226 ENSPREP00000024365 ENSPREP00000024365 LOC103480619 LOC103480619 stx8 stx8 LOC103478192 LOC103478192 lamtor2 lamtor2 LOC103465062 LOC103465062 prc1 prc1 marchf8 marchf8 LOC103466144 LOC103466144 tsg101 tsg101 lamtor1 lamtor1 LOC103467913 LOC103467913 tmem165 tmem165 pip4p1 pip4p1 RAB27B RAB27B stard3nl stard3nl LOC103468625 LOC103468625 LOC103463808 LOC103463808 LOC103464227 LOC103464227 SNX14 SNX14 chmp1b chmp1b LOC103465512 LOC103465512 lamp1 lamp1 slc1a1 slc1a1 LOC103464284 LOC103464284 LOC103470412 LOC103470412 LOC103470937 LOC103470937 vamp7 vamp7 tpcn2 tpcn2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lamp3Uncharacterized protein. (226 aa)
marchf1Membrane-associated ring finger (C3HC4) 1. (587 aa)
LitafLITAF domain-containing protein. (171 aa)
ENSPREP00000000182Calponin-homology (CH) domain-containing protein. (109 aa)
vps37aVPS37A subunit of ESCRT-I. (394 aa)
mvb12aUncharacterized protein. (258 aa)
LOC103465719LITAF domain-containing protein. (137 aa)
ENSPREP00000000543LITAF domain-containing protein. (143 aa)
LOC108166155Si:ch211-202h22.7. (130 aa)
ENSPREP00000001090Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family. (180 aa)
LOC103469312LITAF domain-containing protein. (198 aa)
vti1aVesicle transport through interaction with t-SNAREs 1A. (224 aa)
LOC103477692Transmembrane protein 106Ba. (258 aa)
NSG1Neuronal vesicle trafficking associated 1. (148 aa)
ENSPREP00000001350Uncharacterized protein. (93 aa)
rab27aRAB27A, member RAS oncogene family. (163 aa)
LOC103468028Charged multivesicular body protein 4Bb. (221 aa)
slc39a14Solute carrier family 39 member 14. (509 aa)
LOC103468818Charged multivesicular body protein 6a. (207 aa)
vps4aVacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family. (436 aa)
hgsHepatocyte growth factor-regulated tyrosine kinase substrate. (765 aa)
LOC103464530ADP-ribosylation factor-like 8Ba; Belongs to the small GTPase superfamily. Arf family. (186 aa)
ENSPREP00000006128Uncharacterized protein. (496 aa)
VPS4BVacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (437 aa)
LOC103480104Si:ch211-212k18.7. (245 aa)
LOC103458696Amino acid transporter. (490 aa)
LOC103468098ADP-ribosylation factor-like 8A; Belongs to the small GTPase superfamily. Arf family. (231 aa)
ubxn6UBX domain protein 6. (438 aa)
anxa6Annexin. (665 aa)
atg9aAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (883 aa)
nsg2Neuronal vesicle trafficking associated 2. (180 aa)
vps41Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family. (846 aa)
lamtor4Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4. (98 aa)
vps28Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (210 aa)
snx16Sorting nexin 16. (328 aa)
LOC103469909Uncharacterized protein. (227 aa)
pip4p2Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (257 aa)
cdip1Cell death-inducing p53 target 1. (223 aa)
LOC103468700LITAF domain-containing protein. (199 aa)
atg9bAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (808 aa)
yipf2Yip1 domain family, member 2. (408 aa)
chmp4cCharged multivesicular body protein 4C. (242 aa)
vps39VPS39 subunit of HOPS complex. (876 aa)
slc30a4Solute carrier family 30 member 4. (450 aa)
vps33aVPS33A core subunit of CORVET and HOPS complexes; Belongs to the STXBP/unc-18/SEC1 family. (600 aa)
ENSPREP00000012632MIT domain-containing protein. (55 aa)
mitd1MIT, microtubule interacting and transport, domain containing 1. (180 aa)
gosr2Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (212 aa)
vti1bVesicle transport through interaction with t-SNAREs 1B. (159 aa)
LOC103462826Tetraspanin. (284 aa)
LOC103480138Lysosomal associated membrane protein 1. (253 aa)
LOC103467077Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1132 aa)
rmc1Regulator of MON1-CCZ1. (655 aa)
abcb6ATP-binding cassette, sub-family B (MDR/TAP), member 6a. (863 aa)
wdr81WD repeat domain 81. (2056 aa)
ap5m1Adaptor related protein complex 5 subunit mu 1; Belongs to the adaptor complexes medium subunit family. (490 aa)
vps16Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. (834 aa)
stard3StAR-related lipid transfer (START) domain containing 3. (477 aa)
LOC103469428Zgc:91968. (235 aa)
plekhm1Pleckstrin homology domain containing, family M (with RUN domain) member 1. (1080 aa)
LOC103470619Multivesicular body subunit 12Bb. (244 aa)
lamtor3Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3. (135 aa)
yipf1Protein YIPF. (303 aa)
tmem59Transmembrane protein 59. (325 aa)
mvb12bMultivesicular body subunit 12Ba. (315 aa)
ENSPREP00000017474Uncharacterized protein. (93 aa)
lamp2Lysosomal-associated membrane protein 2. (411 aa)
RAB7ARAB7A, member RAS oncogene family. (207 aa)
slc38a9Solute carrier family 38 member 9. (558 aa)
ENSPREP00000018366Uncharacterized protein. (128 aa)
LOC103471929Uncharacterized protein. (302 aa)
chmp2bCharged multivesicular body protein 2Bb. (216 aa)
chmp2aCharged multivesicular body protein 2A. (262 aa)
LOC103467156Amino acid transporter. (332 aa)
wdr91WD repeat domain 91. (619 aa)
vps18VPS18 core subunit of CORVET and HOPS complexes. (982 aa)
vps11Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family. (928 aa)
lamtor5Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5. (118 aa)
LOC103476297Si:ch211-284f22.3. (298 aa)
vps36Vacuolar protein sorting 36 homolog. (382 aa)
chmp3Charged multivesicular body protein 3. (221 aa)
LOC103469560Cytochrome b561 family, member A3a. (239 aa)
chmp6Charged multivesicular body protein 6. (207 aa)
ENSPREP00000022284Uncharacterized protein. (120 aa)
vps37bZgc:114173. (284 aa)
kidins220Kinase D-interacting substrate 220b. (1317 aa)
LOC103469543Tetraspanin. (353 aa)
ENSPREP00000022754Vesicle-associated membrane protein 8 (endobrevin). (118 aa)
ENSPREP00000022805V-SNARE coiled-coil homology domain-containing protein. (116 aa)
abhd6Abhydrolase domain containing 6b. (324 aa)
LOC103460482Uncharacterized protein. (222 aa)
sorl1Sortilin-related receptor, L(DLR class) A repeats containing. (2086 aa)
LAMP5Lysosomal associated membrane protein family member 5. (269 aa)
LOC103467226Uncharacterized protein. (479 aa)
ENSPREP00000024365LITAF domain-containing protein. (239 aa)
LOC103480619Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (322 aa)
stx8Syntaxin 8. (332 aa)
LOC103478192Lysosomal protein transmembrane 4 beta. (220 aa)
lamtor2Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2. (95 aa)
LOC103465062RAB7a, member RAS oncogene family. (207 aa)
prc1VPS33B late endosome and lysosome associated; Belongs to the STXBP/unc-18/SEC1 family. (613 aa)
marchf8Membrane-associated ring finger (C3HC4) 8. (580 aa)
LOC103466144Zgc:123278. (130 aa)
tsg101Tumor susceptibility 101a. (390 aa)
lamtor1Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1. (160 aa)
LOC103467913Premelanosome protein b. (610 aa)
tmem165GDT1 family protein. (302 aa)
pip4p1Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (260 aa)
RAB27BRAB27B, member RAS oncogene family. (218 aa)
stard3nlSTARD3 N-terminal like. (230 aa)
LOC103468625LITAF domain-containing protein. (123 aa)
LOC103463808Uncharacterized protein; Belongs to the AAA ATPase family. (411 aa)
LOC103464227Uncharacterized protein. (253 aa)
SNX14Sorting nexin 14. (1016 aa)
chmp1bChromatin modifying protein 1B. (161 aa)
LOC103465512Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (186 aa)
lamp1Lysosomal associated membrane protein 1a. (409 aa)
slc1a1Amino acid transporter. (522 aa)
LOC103464284Abhydrolase domain containing 6. (335 aa)
LOC103470412VPS37C subunit of ESCRT-I. (360 aa)
LOC103470937Uncharacterized protein. (214 aa)
vamp7Synaptobrevin-like 1; Belongs to the synaptobrevin family. (220 aa)
tpcn2Uncharacterized protein. (683 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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