STRINGSTRING
slx4 slx4 dhx36 dhx36 dkc1 dkc1 LOC103480107 LOC103480107 atrx atrx cct2 cct2 ino80d ino80d LOC103473565 LOC103473565 rad50 rad50 nek2 nek2 tfpt tfpt pnkp pnkp xrcc5 xrcc5 ercc1 ercc1 uchl5 uchl5 atr atr ppp1r10 ppp1r10 terf2 terf2 ino80e ino80e ino80 ino80 cct5 cct5 mcrs1 mcrs1 mapkapk5 mapkapk5 cct3 cct3 fbxo4 fbxo4 atm atm pot1 pot1 LOC103479463 LOC103479463 map2k7 map2k7 LOC103466742 LOC103466742 nfrkb nfrkb LOC103469721 LOC103469721 naf1 naf1 map3k4 map3k4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
slx4SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae). (1463 aa)
dhx36DEAH (Asp-Glu-Ala-His) box polypeptide 36. (1057 aa)
dkc1Dyskeratosis congenita 1, dyskerin. (553 aa)
LOC103480107Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (263 aa)
atrxATRX chromatin remodeler. (2188 aa)
cct2Chaperonin containing TCP1, subunit 2 (beta). (535 aa)
ino80dINO80 complex subunit Da. (1025 aa)
LOC103473565Poly [ADP-ribose] polymerase. (1285 aa)
rad50RAD50 homolog, double strand break repair protein. (1355 aa)
nek2NIMA-related kinase 2. (352 aa)
tfptTCF3 (E2A) fusion partner. (199 aa)
pnkpPolynucleotide kinase 3'-phosphatase. (593 aa)
xrcc5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (731 aa)
ercc1Excision repair cross-complementation group 1. (358 aa)
uchl5Ubiquitin carboxyl-terminal hydrolase. (339 aa)
atrATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2589 aa)
ppp1r10Protein phosphatase 1, regulatory subunit 10. (805 aa)
terf2HTH myb-type domain-containing protein. (635 aa)
ino80eINO80 complex subunit E. (211 aa)
ino80INO80 complex ATPase subunit. (1484 aa)
cct5Chaperonin containing TCP1, subunit 5 (epsilon). (541 aa)
mcrs1Microspherule protein 1. (474 aa)
mapkapk5MAPK activated protein kinase 5. (471 aa)
cct3T-complex protein 1 subunit gamma. (540 aa)
fbxo4F-box protein 4. (361 aa)
atmNon-specific serine/threonine protein kinase. (3091 aa)
pot1Telo_bind domain-containing protein. (763 aa)
LOC103479463Sirtuin 6. (339 aa)
map2k7Mitogen-activated protein kinase kinase 7. (418 aa)
LOC103466742Uncharacterized protein. (442 aa)
nfrkbNuclear factor related to kappaB binding protein. (1283 aa)
LOC103469721Poly [ADP-ribose] polymerase. (1263 aa)
naf1Uncharacterized protein. (481 aa)
map3k4Mitogen-activated protein kinase kinase kinase 4. (1587 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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