16 items (Poecilia reticulata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TPPP	Tubulin polymerization promoting protein. (220 aa)
	LOC103456930	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (1707 aa)
	CD9	Tetraspanin. (210 aa)
	PMP22	Peripheral myelin protein 22b. (108 aa)
	LOC103466662	Tetraspanin. (237 aa)
	ENSPREP00000004585	Uncharacterized protein. (196 aa)
	FIG4	FIG4 phosphoinositide 5-phosphatase. (901 aa)
	Adgrg4	Uncharacterized protein. (121 aa)
	LOC103457687	Si:ch73-21k16.5; Belongs to the GPAT/DAPAT family. (676 aa)
	LOC103460961	Integrin beta. (357 aa)
	ENSPREP00000021318	Adhesion G protein-coupled receptor G6; Belongs to the G-protein coupled receptor 2 family. (956 aa)
	ENSPREP00000025224	PlsC domain-containing protein. (270 aa)
	pikfyve	Phosphoinositide kinase, FYVE finger containing. (2073 aa)
	itgb4	Integrin, beta 4. (1248 aa)
	ercc2	Excision repair cross-complementation group 2. (655 aa)
	LOC103475437	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (1042 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CD9	LOC103460961	ENSPREP00000031884	ENSPREP00000018238	Tetraspanin.	Integrin beta.	0.443
CD9	itgb4	ENSPREP00000031884	ENSPREP00000027905	Tetraspanin.	Integrin, beta 4.	0.443
FIG4	pikfyve	ENSPREP00000003025	ENSPREP00000025267	FIG4 phosphoinositide 5-phosphatase.	Phosphoinositide kinase, FYVE finger containing.	0.999
LOC103460961	CD9	ENSPREP00000018238	ENSPREP00000031884	Integrin beta.	Tetraspanin.	0.443
LOC103460961	LOC103466662	ENSPREP00000018238	ENSPREP00000008818	Integrin beta.	Tetraspanin.	0.443
LOC103460961	itgb4	ENSPREP00000018238	ENSPREP00000027905	Integrin beta.	Integrin, beta 4.	0.947
LOC103466662	LOC103460961	ENSPREP00000008818	ENSPREP00000018238	Tetraspanin.	Integrin beta.	0.443
LOC103466662	itgb4	ENSPREP00000008818	ENSPREP00000027905	Tetraspanin.	Integrin, beta 4.	0.443
itgb4	CD9	ENSPREP00000027905	ENSPREP00000031884	Integrin, beta 4.	Tetraspanin.	0.443
itgb4	LOC103460961	ENSPREP00000027905	ENSPREP00000018238	Integrin, beta 4.	Integrin beta.	0.947
itgb4	LOC103466662	ENSPREP00000027905	ENSPREP00000008818	Integrin, beta 4.	Tetraspanin.	0.443
pikfyve	FIG4	ENSPREP00000025267	ENSPREP00000003025	Phosphoinositide kinase, FYVE finger containing.	FIG4 phosphoinositide 5-phosphatase.	0.999