STRINGSTRING
smpdl3b smpdl3b LOC103465656 LOC103465656 otud4 otud4 acod1 acod1 ENSPREP00000010947 ENSPREP00000010947 gramd4 gramd4 tnfaip3 tnfaip3 nfkbil1 nfkbil1 mfhas1 mfhas1 LOC103469458 LOC103469458 gps2 gps2 LOC103467373 LOC103467373 sarm1 sarm1 lgr4 lgr4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
smpdl3bAcid sphingomyelinase-like phosphodiesterase. (460 aa)
LOC103465656GRAM domain-containing protein. (593 aa)
otud4OTU domain-containing protein. (877 aa)
acod1Aconitate decarboxylase 1. (531 aa)
ENSPREP00000010947Uncharacterized protein. (306 aa)
gramd4GRAM domain containing 4a. (617 aa)
tnfaip3Tumor necrosis factor, alpha-induced protein 3. (799 aa)
nfkbil1Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1. (342 aa)
mfhas1Malignant fibrous histiocytoma amplified sequence 1. (1028 aa)
LOC103469458Nuclear receptor subfamily 1, group d, member 1. (523 aa)
gps2G protein pathway suppressor 2. (335 aa)
LOC103467373Nuclear receptor subfamily 1, group D, member 4a. (585 aa)
sarm1Sterile alpha and TIR motif containing 1. (752 aa)
lgr4Leucine-rich repeat containing G protein-coupled receptor 4. (913 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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