(36 nodes) Vitamin transmembrane transport network (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rbp4	Retinol binding protein 4, plasma; Belongs to the calycin superfamily. Lipocalin family. (199 aa)
	LOC103481193	Zgc:110789. (567 aa)
	LOC103458024	Solute carrier family 5 member 6a; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (634 aa)
	LOC103469718	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (195 aa)
	abcd4	ATP-binding cassette, sub-family D (ALD), member 4. (617 aa)
	LOC103468576	Solute carrier family 2 member 6; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (497 aa)
	folr2	Folate receptor. (242 aa)
	ENSPREP00000028482	Uncharacterized protein. (587 aa)
	slc2a6	Solute carrier family 2 member 8; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (487 aa)
	LOC103474433	Solute carrier family 19 member 3b. (481 aa)
	LOC103474432	Solute carrier family 19 member 3a. (489 aa)
	slc19a2	Solute carrier family 19 member 2. (461 aa)
	LOC103458340	Solute carrier family 5 member 6; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (614 aa)
	LOC103457866	Uncharacterized protein. (564 aa)
	slc25a32	Solute carrier family 25 member 32b; Belongs to the mitochondrial carrier (TC 2.A.29) family. (325 aa)
	ccdc181	Coiled-coil domain containing 181. (505 aa)
	LOC103460335	Si:ch73-196l6.5. (440 aa)
	LOC103460334	Solute carrier family 52 member 2. (455 aa)
	scarb1	Scavenger receptor class B, member 1; Belongs to the CD36 family. (490 aa)
	LOC103478266	Zgc:91890. (456 aa)
	rtbdn	Zgc:109949. (363 aa)
	LOC103479798	Apolipoprotein Da, duplicate 2; Belongs to the calycin superfamily. Lipocalin family. (189 aa)
	LOC103479803	Apolipoprotein Da, duplicate 2; Belongs to the calycin superfamily. Lipocalin family. (190 aa)
	slc19a1	Solute carrier family 19 member 1. (502 aa)
	LOC103470053	Solute carrier family 23 member 2. (716 aa)
	stra6	Stimulated by retinoic acid 6. (666 aa)
	LOC103473653	Retinol binding protein 4, like; Belongs to the calycin superfamily. Lipocalin family. (196 aa)
	slc27a1	Solute carrier family 27 member 1a. (648 aa)
	slc23a1	Solute carrier family 23 member 1. (610 aa)
	LOC103465623	Si:dkey-106n21.1. (602 aa)
	slc44a4	Solute carrier family 44 member 4; Belongs to the CTL (choline transporter-like) family. (718 aa)
	LOC103480848	ATP-binding cassette, sub-family G (WHITE), member 2a. (633 aa)
	ENSPREP00000002302	ATP-binding cassette, sub-family G (WHITE), member 2d. (603 aa)
	slc52a3	Solute carrier family 52 member 3. (445 aa)
	LOC103469345	STRA6-like. (588 aa)
	LOC103462236	ATP-binding cassette, sub-family G (WHITE), member 2c. (594 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000028482	LOC103479798	ENSPREP00000028482	ENSPREP00000020354	Uncharacterized protein.	Apolipoprotein Da, duplicate 2; Belongs to the calycin superfamily. Lipocalin family.	0.409
ENSPREP00000028482	LOC103479803	ENSPREP00000028482	ENSPREP00000020338	Uncharacterized protein.	Apolipoprotein Da, duplicate 2; Belongs to the calycin superfamily. Lipocalin family.	0.409
ENSPREP00000028482	rbp4	ENSPREP00000028482	ENSPREP00000033535	Uncharacterized protein.	Retinol binding protein 4, plasma; Belongs to the calycin superfamily. Lipocalin family.	0.804
LOC103479798	ENSPREP00000028482	ENSPREP00000020354	ENSPREP00000028482	Apolipoprotein Da, duplicate 2; Belongs to the calycin superfamily. Lipocalin family.	Uncharacterized protein.	0.409
LOC103479798	stra6	ENSPREP00000020354	ENSPREP00000014443	Apolipoprotein Da, duplicate 2; Belongs to the calycin superfamily. Lipocalin family.	Stimulated by retinoic acid 6.	0.409
LOC103479803	ENSPREP00000028482	ENSPREP00000020338	ENSPREP00000028482	Apolipoprotein Da, duplicate 2; Belongs to the calycin superfamily. Lipocalin family.	Uncharacterized protein.	0.409
LOC103479803	stra6	ENSPREP00000020338	ENSPREP00000014443	Apolipoprotein Da, duplicate 2; Belongs to the calycin superfamily. Lipocalin family.	Stimulated by retinoic acid 6.	0.409
folr2	rtbdn	ENSPREP00000028700	ENSPREP00000021251	Folate receptor.	Zgc:109949.	0.908
folr2	slc19a1	ENSPREP00000028700	ENSPREP00000018815	Folate receptor.	Solute carrier family 19 member 1.	0.548
rbp4	ENSPREP00000028482	ENSPREP00000033535	ENSPREP00000028482	Retinol binding protein 4, plasma; Belongs to the calycin superfamily. Lipocalin family.	Uncharacterized protein.	0.804
rbp4	stra6	ENSPREP00000033535	ENSPREP00000014443	Retinol binding protein 4, plasma; Belongs to the calycin superfamily. Lipocalin family.	Stimulated by retinoic acid 6.	0.804
rtbdn	folr2	ENSPREP00000021251	ENSPREP00000028700	Zgc:109949.	Folate receptor.	0.908
scarb1	slc27a1	ENSPREP00000021860	ENSPREP00000007094	Scavenger receptor class B, member 1; Belongs to the CD36 family.	Solute carrier family 27 member 1a.	0.549
slc19a1	folr2	ENSPREP00000018815	ENSPREP00000028700	Solute carrier family 19 member 1.	Folate receptor.	0.548
slc27a1	scarb1	ENSPREP00000007094	ENSPREP00000021860	Solute carrier family 27 member 1a.	Scavenger receptor class B, member 1; Belongs to the CD36 family.	0.549
stra6	LOC103479798	ENSPREP00000014443	ENSPREP00000020354	Stimulated by retinoic acid 6.	Apolipoprotein Da, duplicate 2; Belongs to the calycin superfamily. Lipocalin family.	0.409
stra6	LOC103479803	ENSPREP00000014443	ENSPREP00000020338	Stimulated by retinoic acid 6.	Apolipoprotein Da, duplicate 2; Belongs to the calycin superfamily. Lipocalin family.	0.409
stra6	rbp4	ENSPREP00000014443	ENSPREP00000033535	Stimulated by retinoic acid 6.	Retinol binding protein 4, plasma; Belongs to the calycin superfamily. Lipocalin family.	0.804