(9 nodes) SNARE complex assembly network (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPREP00000001234	Vesicle-associated membrane protein 4. (117 aa)
	LOC103472839	Vesicle-associated membrane protein 1. (150 aa)
	ENSPREP00000002501	Vesicle-associated membrane protein 2. (122 aa)
	ENSPREP00000004746	V-SNARE coiled-coil homology domain-containing protein. (94 aa)
	stxbp6	Syntaxin binding protein 6 (amisyn). (210 aa)
	uvrag	UV radiation resistance associated gene. (743 aa)
	ENSPREP00000016345	Zgc:92912. (125 aa)
	ENSPREP00000022754	Vesicle-associated membrane protein 8 (endobrevin). (118 aa)
	ENSPREP00000022805	V-SNARE coiled-coil homology domain-containing protein. (116 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000001234	ENSPREP00000002501	ENSPREP00000001234	ENSPREP00000002501	Vesicle-associated membrane protein 4.	Vesicle-associated membrane protein 2.	0.736
ENSPREP00000001234	ENSPREP00000004746	ENSPREP00000001234	ENSPREP00000004746	Vesicle-associated membrane protein 4.	V-SNARE coiled-coil homology domain-containing protein.	0.639
ENSPREP00000001234	ENSPREP00000016345	ENSPREP00000001234	ENSPREP00000016345	Vesicle-associated membrane protein 4.	Zgc:92912.	0.736
ENSPREP00000001234	ENSPREP00000022754	ENSPREP00000001234	ENSPREP00000022754	Vesicle-associated membrane protein 4.	Vesicle-associated membrane protein 8 (endobrevin).	0.578
ENSPREP00000001234	ENSPREP00000022805	ENSPREP00000001234	ENSPREP00000022805	Vesicle-associated membrane protein 4.	V-SNARE coiled-coil homology domain-containing protein.	0.578
ENSPREP00000001234	LOC103472839	ENSPREP00000001234	ENSPREP00000001577	Vesicle-associated membrane protein 4.	Vesicle-associated membrane protein 1.	0.736
ENSPREP00000002501	ENSPREP00000001234	ENSPREP00000002501	ENSPREP00000001234	Vesicle-associated membrane protein 2.	Vesicle-associated membrane protein 4.	0.736
ENSPREP00000002501	ENSPREP00000004746	ENSPREP00000002501	ENSPREP00000004746	Vesicle-associated membrane protein 2.	V-SNARE coiled-coil homology domain-containing protein.	0.765
ENSPREP00000002501	ENSPREP00000022754	ENSPREP00000002501	ENSPREP00000022754	Vesicle-associated membrane protein 2.	Vesicle-associated membrane protein 8 (endobrevin).	0.431
ENSPREP00000004746	ENSPREP00000001234	ENSPREP00000004746	ENSPREP00000001234	V-SNARE coiled-coil homology domain-containing protein.	Vesicle-associated membrane protein 4.	0.639
ENSPREP00000004746	ENSPREP00000002501	ENSPREP00000004746	ENSPREP00000002501	V-SNARE coiled-coil homology domain-containing protein.	Vesicle-associated membrane protein 2.	0.765
ENSPREP00000004746	ENSPREP00000016345	ENSPREP00000004746	ENSPREP00000016345	V-SNARE coiled-coil homology domain-containing protein.	Zgc:92912.	0.765
ENSPREP00000004746	ENSPREP00000022754	ENSPREP00000004746	ENSPREP00000022754	V-SNARE coiled-coil homology domain-containing protein.	Vesicle-associated membrane protein 8 (endobrevin).	0.626
ENSPREP00000004746	ENSPREP00000022805	ENSPREP00000004746	ENSPREP00000022805	V-SNARE coiled-coil homology domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.613
ENSPREP00000004746	LOC103472839	ENSPREP00000004746	ENSPREP00000001577	V-SNARE coiled-coil homology domain-containing protein.	Vesicle-associated membrane protein 1.	0.975
ENSPREP00000016345	ENSPREP00000001234	ENSPREP00000016345	ENSPREP00000001234	Zgc:92912.	Vesicle-associated membrane protein 4.	0.736
ENSPREP00000016345	ENSPREP00000004746	ENSPREP00000016345	ENSPREP00000004746	Zgc:92912.	V-SNARE coiled-coil homology domain-containing protein.	0.765
ENSPREP00000016345	ENSPREP00000022754	ENSPREP00000016345	ENSPREP00000022754	Zgc:92912.	Vesicle-associated membrane protein 8 (endobrevin).	0.428
ENSPREP00000022754	ENSPREP00000001234	ENSPREP00000022754	ENSPREP00000001234	Vesicle-associated membrane protein 8 (endobrevin).	Vesicle-associated membrane protein 4.	0.578
ENSPREP00000022754	ENSPREP00000002501	ENSPREP00000022754	ENSPREP00000002501	Vesicle-associated membrane protein 8 (endobrevin).	Vesicle-associated membrane protein 2.	0.431