STRINGSTRING
lrrk2 lrrk2 LOC103477848 LOC103477848 clg5h12orf10 clg5h12orf10 LOC103473017 LOC103473017 LOC103467387 LOC103467387 LOC103469022 LOC103469022 brinp1 brinp1 ube3a ube3a UBE3A UBE3A LOC103481979 LOC103481979 ptpn5 ptpn5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lrrk2Leucine-rich repeat kinase 2. (2573 aa)
LOC103477848Apolipoprotein Eb. (265 aa)
clg5h12orf10Melanocyte proliferating gene 1. (333 aa)
LOC103473017Apolipoprotein Ea. (251 aa)
LOC103467387Leucine rich repeat transmembrane neuronal 1. (524 aa)
LOC103469022Uncharacterized protein; Belongs to the integrin alpha chain family. (900 aa)
brinp1Bone morphogenetic protein/retinoic acid inducible neural-specific 1. (761 aa)
ube3aUbiquitin protein ligase E3A. (823 aa)
UBE3AUbiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates. (944 aa)
LOC103481979Integrin, alpha 3b; Belongs to the integrin alpha chain family. (1089 aa)
ptpn5Protein tyrosine phosphatase non-receptor type 5. (570 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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