Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LOC103459140 | fastkd2 | ENSPREP00000033313 | ENSPREP00000015239 | Uncharacterized protein. | FAST kinase domains 2. | 0.499 |
| LOC103470725 | ddx28 | ENSPREP00000019767 | ENSPREP00000004087 | G-rich RNA sequence binding factor 1. | DEAD (Asp-Glu-Ala-Asp) box polypeptide 28. | 0.535 |
| LOC103470725 | dhx30 | ENSPREP00000019767 | ENSPREP00000014851 | G-rich RNA sequence binding factor 1. | DEAH (Asp-Glu-Ala-His) box helicase 30. | 0.483 |
| LOC103470725 | fastkd2 | ENSPREP00000019767 | ENSPREP00000015239 | G-rich RNA sequence binding factor 1. | FAST kinase domains 2. | 0.448 |
| LOC103470725 | lrpprc | ENSPREP00000019767 | ENSPREP00000005290 | G-rich RNA sequence binding factor 1. | Leucine-rich pentatricopeptide repeat containing. | 0.441 |
| LOC103470725 | polrmt | ENSPREP00000019767 | ENSPREP00000011269 | G-rich RNA sequence binding factor 1. | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. | 0.427 |
| LOC103470725 | supv3l1 | ENSPREP00000019767 | ENSPREP00000021777 | G-rich RNA sequence binding factor 1. | SUV3-like helicase. | 0.439 |
| LOC103470725 | trmt10c | ENSPREP00000019767 | ENSPREP00000032184 | G-rich RNA sequence binding factor 1. | tRNA methyltransferase 10C, mitochondrial RNase P subunit. | 0.446 |
| MTERF1 | fastkd2 | ENSPREP00000018253 | ENSPREP00000015239 | Mitochondrial transcription termination factor 1. | FAST kinase domains 2. | 0.769 |
| MTERF1 | tfb2m | ENSPREP00000018253 | ENSPREP00000016054 | Mitochondrial transcription termination factor 1. | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.487 |
| atp5f1b | clpx | ENSPREP00000019616 | ENSPREP00000021287 | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Caseinolytic mitochondrial matrix peptidase chaperone subunit b. | 0.611 |
| atp5f1b | hspa9 | ENSPREP00000019616 | ENSPREP00000001232 | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Heat shock protein 9; Belongs to the heat shock protein 70 family. | 0.655 |
| atp5f1b | tufm | ENSPREP00000019616 | ENSPREP00000020585 | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. | Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.787 |
| clpx | atp5f1b | ENSPREP00000021287 | ENSPREP00000019616 | Caseinolytic mitochondrial matrix peptidase chaperone subunit b. | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.611 |
| clpx | hspa9 | ENSPREP00000021287 | ENSPREP00000001232 | Caseinolytic mitochondrial matrix peptidase chaperone subunit b. | Heat shock protein 9; Belongs to the heat shock protein 70 family. | 0.492 |
| clpx | lonp1 | ENSPREP00000021287 | ENSPREP00000030554 | Caseinolytic mitochondrial matrix peptidase chaperone subunit b. | Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. | 0.775 |
| clpx | polrmt | ENSPREP00000021287 | ENSPREP00000011269 | Caseinolytic mitochondrial matrix peptidase chaperone subunit b. | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. | 0.479 |
| clpx | ssbp1 | ENSPREP00000021287 | ENSPREP00000033682 | Caseinolytic mitochondrial matrix peptidase chaperone subunit b. | Single-stranded DNA binding protein 1. | 0.625 |
| clpx | tfam | ENSPREP00000021287 | ENSPREP00000005388 | Caseinolytic mitochondrial matrix peptidase chaperone subunit b. | Transcription factor A, mitochondrial. | 0.510 |
| clpx | tfb1m | ENSPREP00000021287 | ENSPREP00000033041 | Caseinolytic mitochondrial matrix peptidase chaperone subunit b. | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.416 |
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