STRINGSTRING
rnls rnls bbs4 bbs4 scpep1 scpep1 mkks mkks apln apln bmpr2 bmpr2 LOC103459727 LOC103459727 LOC103461763 LOC103461763 ucn ucn kcnk6 kcnk6 ENSPREP00000029273 ENSPREP00000029273 vegfc vegfc adrb1 adrb1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rnlsRenalase, FAD-dependent amine oxidase. (349 aa)
bbs4Bardet-Biedl syndrome 4. (520 aa)
scpep1Carboxypeptidase; Belongs to the peptidase S10 family. (445 aa)
mkksMcKusick-Kaufman syndrome. (576 aa)
aplnApelin. (74 aa)
bmpr2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1042 aa)
LOC103459727Uncharacterized protein. (169 aa)
LOC103461763Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (871 aa)
ucnUrotensin 1. (147 aa)
kcnk6Potassium channel subfamily K member. (316 aa)
ENSPREP00000029273Adrenoceptor beta 2, surface a. (445 aa)
vegfcVascular endothelial growth factor c; Belongs to the PDGF/VEGF growth factor family. (420 aa)
adrb1Adrenoceptor beta 1. (397 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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