STRINGSTRING
edn1 edn1 LOC103477155 LOC103477155 Tgfa Tgfa LOC103473479 LOC103473479 anapc11 anapc11 cdc16 cdc16 mad2l1bp mad2l1bp igf1 igf1 cdt1 cdt1 LOC103469983 LOC103469983 LOC103469984 LOC103469984 cdc27 cdc27 nsmce2 nsmce2 LOC103470686 LOC103470686 anapc7 anapc7 LOC103479391 LOC103479391 ENSPREP00000027807 ENSPREP00000027807 LOC103474461 LOC103474461 igf2 igf2 LOC103468546 LOC103468546 Rgcc Rgcc anapc5 anapc5 ENSPREP00000032744 ENSPREP00000032744 cdc23 cdc23 smpd3 smpd3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
edn1Endothelin 1. (207 aa)
LOC103477155Platelet-derived growth factor beta polypeptide a; Belongs to the PDGF/VEGF growth factor family. (560 aa)
TgfaTransforming growth factor, alpha. (166 aa)
LOC103473479EGF-like domain-containing protein. (217 aa)
anapc11APC11 anaphase promoting complex subunit 11 homolog (yeast). (84 aa)
cdc16Cell division cycle 16 homolog (S. cerevisiae). (618 aa)
mad2l1bpMAD2L1 binding protein. (372 aa)
igf1Insulin-like growth factor 1. (186 aa)
cdt1Chromatin licensing and DNA replication factor 1. (620 aa)
LOC103469983EGF-like domain-containing protein. (154 aa)
LOC103469984EGF-like domain-containing protein. (176 aa)
cdc27Cell division cycle 27. (803 aa)
nsmce2NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase. (230 aa)
LOC103470686Interleukin-1. (247 aa)
anapc7Anaphase promoting complex subunit 7. (565 aa)
LOC103479391CULLIN_2 domain-containing protein; Belongs to the cullin family. (766 aa)
ENSPREP00000027807Platelet-derived growth factor beta polypeptide b; Belongs to the PDGF/VEGF growth factor family. (393 aa)
LOC103474461Cullin 3; Belongs to the cullin family. (767 aa)
igf2IlGF domain-containing protein. (223 aa)
LOC103468546PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (220 aa)
RgccRegulator of cell cycle. (134 aa)
anapc5Anaphase promoting complex subunit 5. (773 aa)
ENSPREP00000032744Retinoblastoma 1. (864 aa)
cdc23CDC23 (cell division cycle 23, yeast, homolog). (575 aa)
smpd3Sphingomyelin phosphodiesterase 3, neutral. (719 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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