37 items (Poecilia reticulata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cdk5	Cyclin-dependent kinase 5. (262 aa)
	LOC103469909	Uncharacterized protein. (227 aa)
	CADPS2	Calcium dependent secretion activator 2. (1241 aa)
	gab2	GRB2-associated binding protein 2. (676 aa)
	stam	Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1. (512 aa)
	LOC103462870	Synaptotagmin IXa. (559 aa)
	LOC103460214	Uncharacterized protein. (269 aa)
	LOC103462425	Synaptotagmin VIIb. (468 aa)
	pla2g6	Phospholipase A2, group VI (cytosolic, calcium-independent). (821 aa)
	ENSPREP00000001350	Uncharacterized protein. (93 aa)
	rab27a	RAB27A, member RAS oncogene family. (163 aa)
	LOC103466244	Synaptotagmin IXb. (529 aa)
	cadps	Ca2+-dependent activator protein for secretion b. (1329 aa)
	LOC103465552	GATA binding protein 1a. (426 aa)
	LOC103464268	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (211 aa)
	vps4a	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family. (436 aa)
	hgs	Hepatocyte growth factor-regulated tyrosine kinase substrate. (765 aa)
	lamp1	Lysosomal associated membrane protein 1a. (409 aa)
	LOC103463808	Uncharacterized protein; Belongs to the AAA ATPase family. (411 aa)
	LOC103465473	Ca2+-dependent activator protein for secretion a. (1254 aa)
	RAB27B	RAB27B, member RAS oncogene family. (218 aa)
	tsg101	Tumor susceptibility 101a. (390 aa)
	LOC103466144	Zgc:123278. (130 aa)
	LOC103459747	PX domain-containing protein. (433 aa)
	LOC103466429	Secretory carrier-associated membrane protein. (239 aa)
	ENSPREP00000022805	V-SNARE coiled-coil homology domain-containing protein. (116 aa)
	ENSPREP00000022754	Vesicle-associated membrane protein 8 (endobrevin). (118 aa)
	LOC103466036	ZP domain-containing protein. (423 aa)
	VPS4B	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (437 aa)
	pdcd6ip	Programmed cell death 6 interacting protein. (878 aa)
	LOC103462158	Secretory carrier-associated membrane protein. (229 aa)
	LOC103466506	Synaptotagmin VIIa. (606 aa)
	LOC103461636	Sorting nexin 4. (455 aa)
	LOC103476935	ZP domain-containing protein. (392 aa)
	kiaa0100	Si:ch211-259g3.4. (1564 aa)
	LOC103467077	Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1132 aa)
	fgb	Fibrinogen beta chain. (492 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000022754	LOC103462870	ENSPREP00000022754	ENSPREP00000019678	Vesicle-associated membrane protein 8 (endobrevin).	Synaptotagmin IXa.	0.442
ENSPREP00000022754	LOC103466244	ENSPREP00000022754	ENSPREP00000002121	Vesicle-associated membrane protein 8 (endobrevin).	Synaptotagmin IXb.	0.442
ENSPREP00000022754	hgs	ENSPREP00000022754	ENSPREP00000006028	Vesicle-associated membrane protein 8 (endobrevin).	Hepatocyte growth factor-regulated tyrosine kinase substrate.	0.514
ENSPREP00000022754	stam	ENSPREP00000022754	ENSPREP00000020824	Vesicle-associated membrane protein 8 (endobrevin).	Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.	0.506
ENSPREP00000022805	LOC103462870	ENSPREP00000022805	ENSPREP00000019678	V-SNARE coiled-coil homology domain-containing protein.	Synaptotagmin IXa.	0.442
ENSPREP00000022805	LOC103466244	ENSPREP00000022805	ENSPREP00000002121	V-SNARE coiled-coil homology domain-containing protein.	Synaptotagmin IXb.	0.442
ENSPREP00000022805	hgs	ENSPREP00000022805	ENSPREP00000006028	V-SNARE coiled-coil homology domain-containing protein.	Hepatocyte growth factor-regulated tyrosine kinase substrate.	0.514
ENSPREP00000022805	stam	ENSPREP00000022805	ENSPREP00000020824	V-SNARE coiled-coil homology domain-containing protein.	Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.	0.506
LOC103459747	LOC103461636	ENSPREP00000026485	ENSPREP00000016066	PX domain-containing protein.	Sorting nexin 4.	0.901
LOC103461636	LOC103459747	ENSPREP00000016066	ENSPREP00000026485	Sorting nexin 4.	PX domain-containing protein.	0.901
LOC103462870	ENSPREP00000022754	ENSPREP00000019678	ENSPREP00000022754	Synaptotagmin IXa.	Vesicle-associated membrane protein 8 (endobrevin).	0.442
LOC103462870	ENSPREP00000022805	ENSPREP00000019678	ENSPREP00000022805	Synaptotagmin IXa.	V-SNARE coiled-coil homology domain-containing protein.	0.442
LOC103463808	LOC103466144	ENSPREP00000030659	ENSPREP00000028587	Uncharacterized protein; Belongs to the AAA ATPase family.	Zgc:123278.	0.459
LOC103463808	VPS4B	ENSPREP00000030659	ENSPREP00000006219	Uncharacterized protein; Belongs to the AAA ATPase family.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.900
LOC103463808	hgs	ENSPREP00000030659	ENSPREP00000006028	Uncharacterized protein; Belongs to the AAA ATPase family.	Hepatocyte growth factor-regulated tyrosine kinase substrate.	0.522
LOC103463808	pdcd6ip	ENSPREP00000030659	ENSPREP00000007944	Uncharacterized protein; Belongs to the AAA ATPase family.	Programmed cell death 6 interacting protein.	0.751
LOC103463808	tsg101	ENSPREP00000030659	ENSPREP00000028752	Uncharacterized protein; Belongs to the AAA ATPase family.	Tumor susceptibility 101a.	0.459
LOC103463808	vps4a	ENSPREP00000030659	ENSPREP00000004964	Uncharacterized protein; Belongs to the AAA ATPase family.	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.	0.938
LOC103466144	LOC103463808	ENSPREP00000028587	ENSPREP00000030659	Zgc:123278.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.459
LOC103466144	VPS4B	ENSPREP00000028587	ENSPREP00000006219	Zgc:123278.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.459