10 items (Poecilia reticulata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mvb12a	Uncharacterized protein. (258 aa)
	vps4a	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family. (436 aa)
	VPS4B	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family. (437 aa)
	pdcd6ip	Programmed cell death 6 interacting protein. (878 aa)
	LOC103470619	Multivesicular body subunit 12Bb. (244 aa)
	mvb12b	Multivesicular body subunit 12Ba. (315 aa)
	vta1	Vesicle (multivesicular body) trafficking 1. (301 aa)
	LOC103466144	Zgc:123278. (130 aa)
	tsg101	Tumor susceptibility 101a. (390 aa)
	LOC103463808	Uncharacterized protein; Belongs to the AAA ATPase family. (411 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103463808	LOC103466144	ENSPREP00000030659	ENSPREP00000028587	Uncharacterized protein; Belongs to the AAA ATPase family.	Zgc:123278.	0.459
LOC103463808	VPS4B	ENSPREP00000030659	ENSPREP00000006219	Uncharacterized protein; Belongs to the AAA ATPase family.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.900
LOC103463808	pdcd6ip	ENSPREP00000030659	ENSPREP00000007944	Uncharacterized protein; Belongs to the AAA ATPase family.	Programmed cell death 6 interacting protein.	0.751
LOC103463808	tsg101	ENSPREP00000030659	ENSPREP00000028752	Uncharacterized protein; Belongs to the AAA ATPase family.	Tumor susceptibility 101a.	0.459
LOC103463808	vps4a	ENSPREP00000030659	ENSPREP00000004964	Uncharacterized protein; Belongs to the AAA ATPase family.	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.	0.938
LOC103463808	vta1	ENSPREP00000030659	ENSPREP00000021228	Uncharacterized protein; Belongs to the AAA ATPase family.	Vesicle (multivesicular body) trafficking 1.	0.958
LOC103466144	LOC103463808	ENSPREP00000028587	ENSPREP00000030659	Zgc:123278.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.459
LOC103466144	LOC103470619	ENSPREP00000028587	ENSPREP00000016917	Zgc:123278.	Multivesicular body subunit 12Bb.	0.906
LOC103466144	VPS4B	ENSPREP00000028587	ENSPREP00000006219	Zgc:123278.	Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.	0.459
LOC103466144	mvb12a	ENSPREP00000028587	ENSPREP00000000413	Zgc:123278.	Uncharacterized protein.	0.963
LOC103466144	mvb12b	ENSPREP00000028587	ENSPREP00000017353	Zgc:123278.	Multivesicular body subunit 12Ba.	0.906
LOC103466144	pdcd6ip	ENSPREP00000028587	ENSPREP00000007944	Zgc:123278.	Programmed cell death 6 interacting protein.	0.876
LOC103466144	vps4a	ENSPREP00000028587	ENSPREP00000004964	Zgc:123278.	Vacuolar protein sorting 4 homolog A; Belongs to the AAA ATPase family.	0.459
LOC103466144	vta1	ENSPREP00000028587	ENSPREP00000021228	Zgc:123278.	Vesicle (multivesicular body) trafficking 1.	0.674
LOC103470619	LOC103466144	ENSPREP00000016917	ENSPREP00000028587	Multivesicular body subunit 12Bb.	Zgc:123278.	0.906
LOC103470619	mvb12a	ENSPREP00000016917	ENSPREP00000000413	Multivesicular body subunit 12Bb.	Uncharacterized protein.	0.658
LOC103470619	mvb12b	ENSPREP00000016917	ENSPREP00000017353	Multivesicular body subunit 12Bb.	Multivesicular body subunit 12Ba.	0.902
LOC103470619	pdcd6ip	ENSPREP00000016917	ENSPREP00000007944	Multivesicular body subunit 12Bb.	Programmed cell death 6 interacting protein.	0.931
LOC103470619	tsg101	ENSPREP00000016917	ENSPREP00000028752	Multivesicular body subunit 12Bb.	Tumor susceptibility 101a.	0.906
LOC103470619	vta1	ENSPREP00000016917	ENSPREP00000021228	Multivesicular body subunit 12Bb.	Vesicle (multivesicular body) trafficking 1.	0.442