STRINGSTRING
cfap70 cfap70 spast spast LOC103476430 LOC103476430 LOC103469295 LOC103469295 sybu sybu actr10 actr10 LOC103468085 LOC103468085 LOC103476353 LOC103476353 LOC103472088 LOC103472088 rhot2 rhot2 LOC103464064 LOC103464064 trak1 trak1 LOC103465295 LOC103465295
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cfap70Uncharacterized protein. (1083 aa)
spastSpastin; Belongs to the AAA ATPase family. (488 aa)
LOC103476430Trafficking protein, kinesin binding 2. (1008 aa)
LOC103469295Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (623 aa)
sybuSyntabulin (syntaxin-interacting). (686 aa)
actr10Actin related protein 10; Belongs to the actin family. (398 aa)
LOC103468085Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (660 aa)
LOC103476353Uncharacterized protein. (452 aa)
LOC103472088Uncharacterized protein. (878 aa)
rhot2Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (623 aa)
LOC103464064ATP/GTP binding protein-like 4. (543 aa)
trak1Trafficking protein, kinesin binding 1a. (1061 aa)
LOC103465295Si:dkey-28e7.3. (659 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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