STRINGSTRING
LOC103469439 LOC103469439 LOC103475989 LOC103475989 srsf7 srsf7 sfswap sfswap sap18 sap18 c1qbp c1qbp u2af2 u2af2 rbmx rbmx LOC103473757 LOC103473757 ybx1 ybx1 ENSPREP00000030553 ENSPREP00000030553 acin1 acin1 ENSPREP00000032376 ENSPREP00000032376
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103469439U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (508 aa)
LOC103475989Apoptotic chromatin condensation inducer 1b. (1189 aa)
srsf7Serine and arginine rich splicing factor 7b. (236 aa)
sfswapSplicing factor SWAP. (932 aa)
sap18Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins. (153 aa)
c1qbpComplement component 1, q subcomponent binding protein. (289 aa)
u2af2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (470 aa)
rbmxRNA binding motif protein X-linked. (383 aa)
LOC103473757Serine and arginine rich splicing factor 9. (251 aa)
ybx1Y box binding protein 1. (299 aa)
ENSPREP00000030553Serine and arginine rich splicing factor 7a. (149 aa)
acin1Apoptotic chromatin condensation inducer 1a. (933 aa)
ENSPREP00000032376SAP domain-containing protein. (558 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.