STRINGSTRING
FAM53B FAM53B spg11 spg11 ENSPREP00000002203 ENSPREP00000002203 c9orf72 c9orf72 EDNRA EDNRA vcl vcl sema5b sema5b sema3f sema3f LOC103470482 LOC103470482 SRF SRF LOC103462133 LOC103462133 ulk1 ulk1 LOC103481573 LOC103481573 Mycbp2 Mycbp2 ENSPREP00000010244 ENSPREP00000010244 spast spast slit2 slit2 LOC103462612 LOC103462612 edn1 edn1 srf srf auts2 auts2 ENSPREP00000014353 ENSPREP00000014353 LOC103475546 LOC103475546 LOC103471805 LOC103471805 LOC103471340 LOC103471340 dcx dcx LOC103476978 LOC103476978 LOC103470154 LOC103470154 LOC103465510 LOC103465510 ubap1 ubap1 ssna1 ssna1 slit1 slit1 LOC103477638 LOC103477638 LOC103463911 LOC103463911 ENSPREP00000025046 ENSPREP00000025046 LOC103460449 LOC103460449 ulk2 ulk2 ryk ryk LOC103471983 LOC103471983 sema5a sema5a LOC103465968 LOC103465968 LOC103474972 LOC103474972 LOC103471930 LOC103471930 LOC103475124 LOC103475124 LOC103475562 LOC103475562
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FAM53BFamily with sequence similarity 53 member B. (438 aa)
spg11SPG11 vesicle trafficking associated, spatacsin. (2269 aa)
ENSPREP00000002203Unc-51 like autophagy activating kinase 1a. (587 aa)
c9orf72Zgc:100846. (298 aa)
EDNRAEndothelin receptor type A; Belongs to the G-protein coupled receptor 1 family. (372 aa)
vclVinculin b. (1100 aa)
sema5bSema domain-containing protein. (1032 aa)
sema3fSema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa; Belongs to the semaphorin family. (790 aa)
LOC103470482Survival of motor neuron 1, telomeric. (308 aa)
SRFSerum response factor. (243 aa)
LOC103462133Myosin IXAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2310 aa)
ulk1Unc-51 like autophagy activating kinase 1. (1024 aa)
LOC103481573Family with sequence similarity 53 member B. (393 aa)
Mycbp2RING-type domain-containing protein. (497 aa)
ENSPREP00000010244Uncharacterized protein. (446 aa)
spastSpastin; Belongs to the AAA ATPase family. (488 aa)
slit2Slit homolog 2 (Drosophila). (1578 aa)
LOC103462612Uncharacterized protein; Belongs to the semaphorin family. (615 aa)
edn1Endothelin 1. (207 aa)
srfSerum response factor b. (570 aa)
auts2Activator of transcription and developmental regulator AUTS2 a. (1283 aa)
ENSPREP00000014353Semaphorin 7A; Belongs to the semaphorin family. (366 aa)
LOC103475546Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b. (1358 aa)
LOC103471805Slit homolog 3 (Drosophila). (1466 aa)
LOC103471340Endothelin receptor type Aa; Belongs to the G-protein coupled receptor 1 family. (440 aa)
dcxUncharacterized protein. (359 aa)
LOC103476978Vinculin a. (1135 aa)
LOC103470154Slit homolog 1b (Drosophila). (1531 aa)
LOC103465510Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb; Belongs to the semaphorin family. (699 aa)
ubap1Ubiquitin associated protein 1. (455 aa)
ssna1Sjogren syndrome nuclear autoantigen 1. (112 aa)
slit1Slit homolog 1a (Drosophila). (1505 aa)
LOC103477638Si:ch211-113g11.6; Belongs to the semaphorin family. (609 aa)
LOC103463911Cytoplasmic FMR1 interacting protein 1. (1057 aa)
ENSPREP00000025046Ras association (RalGDS/AF-6) and pleckstrin homology domains 1a. (1377 aa)
LOC103460449Neuropilin; Belongs to the neuropilin family. (936 aa)
ulk2Unc-51 like autophagy activating kinase 2. (1055 aa)
rykReceptor like tyrosine kinase. (632 aa)
LOC103471983Endothelin 2. (172 aa)
sema5aSema domain-containing protein. (1153 aa)
LOC103465968Myosin IXAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2459 aa)
LOC103474972Doublecortin-like kinase 1b. (747 aa)
LOC103471930Thrombospondin, type I, domain containing 7Aa. (1602 aa)
LOC103475124Sema domain-containing protein. (1092 aa)
LOC103475562Doublecortin-like kinase 1a. (722 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.