STRINGSTRING
LOC103466551 LOC103466551 LOC103467909 LOC103467909 LOC103472858 LOC103472858 LOC103481427 LOC103481427 LOC103481428 LOC103481428 myo3a myo3a ENSPREP00000001490 ENSPREP00000001490 cabp2 cabp2 LOC103459922 LOC103459922 lum lum pdcl pdcl LOC103465677 LOC103465677 LOC103464572 LOC103464572 LOC103464571 LOC103464571 pde6g pde6g nxnl2 nxnl2 sema5b sema5b rcvrn rcvrn vax2 vax2 myo3b myo3b gnat1 gnat1 LOC103481533 LOC103481533 guca1b guca1b LOC103474780 LOC103474780 adgrv1 adgrv1 ENSPREP00000008634 ENSPREP00000008634 LOC103480256 LOC103480256 ENSPREP00000009710 ENSPREP00000009710 Cln6 Cln6 cln5 cln5 GJD2 GJD2 grk7 grk7 LOC103477278 LOC103477278 Impg2 Impg2 rd3 rd3 nob1 nob1 mfrp mfrp pde6a pde6a cplx3 cplx3 LOC103475648 LOC103475648 LOC103474861 LOC103474861 LOC103478050 LOC103478050 LOC103457389 LOC103457389 cngb1 cngb1 LOC103468243 LOC103468243 LOC103482275 LOC103482275 prph2 prph2 nphp3 nphp3 LOC103473654 LOC103473654 rorb rorb LOC103466550 LOC103466550 GLRB GLRB crygn crygn ENSPREP00000014929 ENSPREP00000014929 LOC103471829 LOC103471829 rpgr rpgr LOC103481110 LOC103481110 ENSPREP00000015555 ENSPREP00000015555 LOC103482329 LOC103482329 LOC103482304 LOC103482304 LOC103479740 LOC103479740 LOC103458439 LOC103458439 LOC103473718 LOC103473718 LOC103458995 LOC103458995 rrh rrh ENSPREP00000017400 ENSPREP00000017400 ush2a ush2a LOC103475124 LOC103475124 LOC103475076 LOC103475076 ENSPREP00000017845 ENSPREP00000017845 LOC103475024 LOC103475024 LOC103463303 LOC103463303 opn4 opn4 rgs9bp rgs9bp LOC103461146 LOC103461146 vsx1 vsx1 crb2 crb2 LOC103473166 LOC103473166 LOC103457115 LOC103457115 LOC103473767 LOC103473767 LOC103477409 LOC103477409 sema5a sema5a crybb1 crybb1 cryba4 cryba4 cep131 cep131 LOC103479310 LOC103479310 LOC103480551 LOC103480551 LOC103480983 LOC103480983 ENSPREP00000021903 ENSPREP00000021903 LOC103467179 LOC103467179 slitrk6 slitrk6 RHO RHO rom1 rom1 cryba2 cryba2 rho rho ENSPREP00000024139 ENSPREP00000024139 LOC103469622 LOC103469622 LOC103457850 LOC103457850 LOC103456948 LOC103456948 LOC103477571 LOC103477571 LOC103476853 LOC103476853 RS1 RS1 LOC103471350 LOC103471350 LOC103474448 LOC103474448 wfs1 wfs1 LOC103467934 LOC103467934 SLC24A1 SLC24A1 crygs crygs lamc1 lamc1 VSX2 VSX2 SLC24A2 SLC24A2 ENSPREP00000028725 ENSPREP00000028725 LOC103470228 LOC103470228 LOC103457589 LOC103457589 opn1sw opn1sw opn5 opn5 crybb2 crybb2 pde6d pde6d ENSPREP00000030157 ENSPREP00000030157 Cabp1 Cabp1 ENSPREP00000030179 ENSPREP00000030179 ush1c ush1c nyx nyx whrn whrn LOC103458803 LOC103458803 LOC103475735 LOC103475735 LOC103473396 LOC103473396 LOC103474533 LOC103474533 LOC103470310 LOC103470310 unc119 unc119 LOC103475259 LOC103475259 ARL6 ARL6 LOC103465544 LOC103465544 guca1a guca1a LOC103470521 LOC103470521 LOC103465586 LOC103465586 LOC103465546 LOC103465546 LOC103465548 LOC103465548 LOC103465549 LOC103465549 cln8 cln8 ENSPREP00000033286 ENSPREP00000033286 ENSPREP00000033301 ENSPREP00000033301 Eys Eys LOC103475785 LOC103475785 pde6c pde6c
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103466551Solute carrier family 24 member 1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (621 aa)
LOC103467909Uncharacterized protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (615 aa)
LOC103472858Recoverin 3. (192 aa)
LOC103481427Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (175 aa)
LOC103481428Crystallin, gamma MX, like 2; Belongs to the beta/gamma-crystallin family. (175 aa)
myo3aMyosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1787 aa)
ENSPREP00000001490Si:dkey-44k1.5. (683 aa)
cabp2Calcium binding protein 2a. (243 aa)
LOC103459922Guanylate cyclase activator 1d. (178 aa)
lumLumican. (342 aa)
pdclPhosducin-like. (306 aa)
LOC103465677Guanylate cyclase. (954 aa)
LOC103464572Rhodopsin. (345 aa)
LOC103464571Rhodopsin. (362 aa)
pde6gPhosphodiesterase 6G, cGMP-specific, rod, gamma, paralog a. (90 aa)
nxnl2Nucleoredoxin like 2. (156 aa)
sema5bSema domain-containing protein. (1032 aa)
rcvrnRecoverin a. (203 aa)
vax2Ventral anterior homeobox 2. (304 aa)
myo3bMyosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1265 aa)
gnat1Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1. (350 aa)
LOC103481533Opsin 4b. (535 aa)
guca1bGuanylate cyclase activator 1B. (211 aa)
LOC103474780Guanylate cyclase. (1100 aa)
adgrv1Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family. (6188 aa)
ENSPREP00000008634Uncharacterized protein. (690 aa)
LOC103480256Guanylate cyclase. (1136 aa)
ENSPREP00000009710Uncharacterized protein. (2328 aa)
Cln6CLN6 transmembrane ER protein a. (290 aa)
cln5CLN5 intracellular trafficking protein. (335 aa)
GJD2Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (304 aa)
grk7G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (557 aa)
LOC103477278G_PROTEIN_RECEP_F1_2 domain-containing protein. (410 aa)
Impg2Interphotoreceptor matrix proteoglycan 2a. (230 aa)
rd3Retinal degeneration 3, GUCY2D regulator. (215 aa)
nob1RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. (457 aa)
mfrpMembrane frizzled-related protein. (673 aa)
pde6aPhosphodiesterase. (873 aa)
cplx3Complexin 3b. (156 aa)
LOC103475648Unc-119 lipid binding chaperone. (250 aa)
LOC103474861Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (306 aa)
LOC103478050Recoverin 2. (193 aa)
LOC103457389Long wave sensitive-4 opsin. (357 aa)
cngb1Cyclic nucleotide gated channel beta 1a. (851 aa)
LOC103468243Phosducin b. (236 aa)
LOC103482275Regulator of G protein signaling 9 binding protein. (261 aa)
prph2Peripherin 2a (retinal degeneration, slow). (344 aa)
nphp3Nephronophthisis 3. (1269 aa)
LOC103473654Phosphodiesterase. (854 aa)
rorbRAR-related orphan receptor B. (479 aa)
LOC103466550Solute carrier family 24 member 1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (727 aa)
GLRBGlycine receptor beta; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (455 aa)
crygnUncharacterized protein; Belongs to the beta/gamma-crystallin family. (252 aa)
ENSPREP00000014929Wolfram syndrome 1a (wolframin). (784 aa)
LOC103471829Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a. (634 aa)
rpgrUncharacterized protein. (1381 aa)
LOC103481110Uncharacterized protein. (1431 aa)
ENSPREP00000015555Uncharacterized protein. (1324 aa)
LOC103482329Cyclic nucleotide gated channel beta 3, tandem duplicate 1. (746 aa)
LOC103482304Cyclic nucleotide gated channel beta 3, tandem duplicate 2. (597 aa)
LOC103479740Crystallin, gamma N1; Belongs to the beta/gamma-crystallin family. (183 aa)
LOC103458439Receptor expression-enhancing protein. (184 aa)
LOC103473718Calcium binding protein 1a. (209 aa)
LOC103458995Peripherin 2-like a. (366 aa)
rrhRetinal pigment epithelium-derived rhodopsin homolog; Belongs to the G-protein coupled receptor 1 family. (336 aa)
ENSPREP00000017400SEA domain-containing protein. (1271 aa)
ush2aUsher syndrome 2A (autosomal recessive, mild). (4818 aa)
LOC103475124Sema domain-containing protein. (1092 aa)
LOC103475076Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (177 aa)
ENSPREP00000017845Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (178 aa)
LOC103475024Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (177 aa)
LOC103463303Crumbs cell polarity complex component 1. (1334 aa)
opn4Opsin 4a (melanopsin). (482 aa)
rgs9bpRegulator of G protein signaling 9 binding protein. (225 aa)
LOC103461146Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (214 aa)
vsx1Uncharacterized protein. (275 aa)
crb2Crumbs cell polarity complex component 2b. (1343 aa)
LOC103473166Uncharacterized protein. (1465 aa)
LOC103457115Uncharacterized protein. (356 aa)
LOC103473767Opsin 4xa. (425 aa)
LOC103477409Peripherin 2b (retinal degeneration, slow). (344 aa)
sema5aSema domain-containing protein. (1153 aa)
crybb1Crystallin, beta B1; Belongs to the beta/gamma-crystallin family. (237 aa)
cryba4Crystallin, beta A4; Belongs to the beta/gamma-crystallin family. (183 aa)
cep131Centrosomal protein 131. (1215 aa)
LOC103479310Phosducin domain-containing protein. (235 aa)
LOC103480551RPGR interacting protein 1. (1005 aa)
LOC103480983Lecithin retinol acyltransferase b, tandem duplicate 1. (273 aa)
ENSPREP00000021903Uncharacterized protein. (192 aa)
LOC103467179Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2. (350 aa)
slitrk6SLIT and NTRK-like family, member 6. (820 aa)
RHOExtra-ocular rhodopsin. (391 aa)
rom1Retinal outer segment membrane protein 1b. (361 aa)
cryba2Crystallin, beta A2b; Belongs to the beta/gamma-crystallin family. (218 aa)
rhoRhodopsin; Photoreceptor required for image-forming vision at low light intensity. While most salt water fish species use retinal as chromophore, most freshwater fish use 3-dehydroretinal, or a mixture of retinal and 3-dehydroretinal (By similarity). Light-induced isomerization of 11-cis to all-trans retinal triggers a conformational change that activates signaling via G-proteins. Subsequent receptor phosphorylation mediates displacement of the bound G-protein alpha subunit by arrestin and terminates signaling (By similarity). (350 aa)
ENSPREP00000024139RP1 axonemal microtubule associated. (235 aa)
LOC103469622Whirlin b. (978 aa)
LOC103457850Opsin 8, group member b; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily. (345 aa)
LOC103456948Si:dkey-57a22.15; Belongs to the beta/gamma-crystallin family. (174 aa)
LOC103477571Nuclear receptor subfamily 2, group F, member 5. (404 aa)
LOC103476853Retinal G protein coupled receptor a; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily. (295 aa)
RS1Retinoschisin 1. (181 aa)
LOC103471350Calcium binding protein 2b. (214 aa)
LOC103474448G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (545 aa)
wfs1Wolfram syndrome 1b (wolframin). (969 aa)
LOC103467934Parapinopsin a. (328 aa)
SLC24A1Solute carrier family 24 member 1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (771 aa)
crygsCrystallin, gamma S2; Belongs to the beta/gamma-crystallin family. (174 aa)
lamc1Laminin, gamma 1. (1610 aa)
VSX2Visual system homeobox 2. (376 aa)
SLC24A2Solute carrier family 24 member 2; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (633 aa)
ENSPREP00000028725F5/8 type C domain-containing protein. (177 aa)
LOC103470228Opsin 4xb; Belongs to the G-protein coupled receptor 1 family. (556 aa)
LOC103457589Uncharacterized protein. (413 aa)
opn1swG_PROTEIN_RECEP_F1_2 domain-containing protein. (336 aa)
opn5Opsin 5; Belongs to the G-protein coupled receptor 1 family. (352 aa)
crybb2Crystallin, beta B2; Belongs to the beta/gamma-crystallin family. (208 aa)
pde6d60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (276 aa)
ENSPREP00000030157Uncharacterized protein. (172 aa)
Cabp1Uncharacterized protein. (255 aa)
ENSPREP00000030179Uncharacterized protein. (89 aa)
ush1cUsher syndrome 1C. (553 aa)
nyxNyctalopin. (480 aa)
whrnWhirlin a. (828 aa)
LOC103458803Interphotoreceptor matrix proteoglycan 1. (967 aa)
LOC103475735Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell. (309 aa)
LOC103473396Laminin, gamma 3. (1298 aa)
LOC103474533Crystallin, beta A1a; Belongs to the beta/gamma-crystallin family. (205 aa)
LOC103470310Si:ch211-156l18.8. (1263 aa)
unc119Unc-119 lipid binding chaperone. (219 aa)
LOC103475259Clarin 1. (200 aa)
ARL6ADP-ribosylation factor-like 6; Belongs to the small GTPase superfamily. Arf family. (185 aa)
LOC103465544G_PROTEIN_RECEP_F1_2 domain-containing protein. (356 aa)
guca1aGuanylate cyclase activator 1A. (182 aa)
LOC103470521Glycine receptor, beta a; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (500 aa)
LOC103465586G_PROTEIN_RECEP_F1_2 domain-containing protein. (360 aa)
LOC103465546G_PROTEIN_RECEP_F1_2 domain-containing protein. (356 aa)
LOC103465548Opsin 1 (cone pigments), short-wave-sensitive 2. (354 aa)
LOC103465549Opsin 1 (cone pigments), short-wave-sensitive 2. (351 aa)
cln8CLN8 transmembrane ER and ERGIC protein. (288 aa)
ENSPREP00000033286Uncharacterized protein. (373 aa)
ENSPREP00000033301Uncharacterized protein. (756 aa)
EysUncharacterized protein. (303 aa)
LOC103475785Guanylate cyclase. (1151 aa)
pde6cPhosphodiesterase. (853 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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