(8 nodes) Cardiac myofibril assembly network (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	neb	Nebulin. (6138 aa)
	SRF	Serum response factor. (243 aa)
	srf	Serum response factor b. (570 aa)
	tcap	Titin-cap (telethonin). (187 aa)
	csrp3	Cysteine and glycine-rich protein 3 (cardiac LIM protein). (193 aa)
	nkx2-5	NK2 homeobox 5. (316 aa)
	adprhl1	ADP-ribosylhydrolase like 1. (1017 aa)
	nrap	Nebulin-related anchoring protein. (1797 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SRF	nkx2-5	ENSPREP00000008765	ENSPREP00000028859	Serum response factor.	NK2 homeobox 5.	0.488
csrp3	neb	ENSPREP00000028608	ENSPREP00000003878	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	Nebulin.	0.452
csrp3	nrap	ENSPREP00000028608	ENSPREP00000033274	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	Nebulin-related anchoring protein.	0.594
csrp3	tcap	ENSPREP00000028608	ENSPREP00000016351	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	Titin-cap (telethonin).	0.671
neb	csrp3	ENSPREP00000003878	ENSPREP00000028608	Nebulin.	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	0.452
neb	nrap	ENSPREP00000003878	ENSPREP00000033274	Nebulin.	Nebulin-related anchoring protein.	0.478
neb	tcap	ENSPREP00000003878	ENSPREP00000016351	Nebulin.	Titin-cap (telethonin).	0.571
nkx2-5	SRF	ENSPREP00000028859	ENSPREP00000008765	NK2 homeobox 5.	Serum response factor.	0.488
nkx2-5	srf	ENSPREP00000028859	ENSPREP00000012906	NK2 homeobox 5.	Serum response factor b.	0.488
nrap	csrp3	ENSPREP00000033274	ENSPREP00000028608	Nebulin-related anchoring protein.	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	0.594
nrap	neb	ENSPREP00000033274	ENSPREP00000003878	Nebulin-related anchoring protein.	Nebulin.	0.478
nrap	tcap	ENSPREP00000033274	ENSPREP00000016351	Nebulin-related anchoring protein.	Titin-cap (telethonin).	0.506
srf	nkx2-5	ENSPREP00000012906	ENSPREP00000028859	Serum response factor b.	NK2 homeobox 5.	0.488
tcap	csrp3	ENSPREP00000016351	ENSPREP00000028608	Titin-cap (telethonin).	Cysteine and glycine-rich protein 3 (cardiac LIM protein).	0.671
tcap	neb	ENSPREP00000016351	ENSPREP00000003878	Titin-cap (telethonin).	Nebulin.	0.571
tcap	nrap	ENSPREP00000016351	ENSPREP00000033274	Titin-cap (telethonin).	Nebulin-related anchoring protein.	0.506