(21 nodes) Positive regulation of transcription initiation from RNA polymerase II promoter network (Poecilia reticulata)

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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Predicted Interactions

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Your Input:
	psmc6	Proteasome 26S subunit, ATPase 6; Belongs to the AAA ATPase family. (389 aa)
	dhx36	DEAH (Asp-Glu-Ala-His) box polypeptide 36. (1057 aa)
	taf13	TATA-box binding protein associated factor 13. (188 aa)
	Taf12	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (159 aa)
	med14	Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1435 aa)
	SRF	Serum response factor. (243 aa)
	ENSPREP00000011339	TAF4 domain-containing protein. (249 aa)
	TAF4	TATA-box binding protein associated factor 4. (878 aa)
	taf3	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (896 aa)
	srf	Serum response factor b. (570 aa)
	gtf2a2	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
	ercc1	Excision repair cross-complementation group 1. (358 aa)
	paxip1	PAX interacting (with transcription-activation domain) protein 1. (1084 aa)
	sub1	PC4 domain-containing protein. (124 aa)
	LOC103465090	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor. (852 aa)
	LOC103466384	TAFH domain-containing protein. (863 aa)
	taf10	TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (186 aa)
	gtf2a1	General transcription factor IIA, 1. (393 aa)
	nkx2-5	NK2 homeobox 5. (316 aa)
	ercc6	Excision repair cross-complementation group 6. (1402 aa)
	taf6	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (637 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000011339	LOC103465090	ENSPREP00000011339	ENSPREP00000024331	TAF4 domain-containing protein.	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.900
ENSPREP00000011339	Taf12	ENSPREP00000011339	ENSPREP00000007202	TAF4 domain-containing protein.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.957
ENSPREP00000011339	gtf2a1	ENSPREP00000011339	ENSPREP00000027319	TAF4 domain-containing protein.	General transcription factor IIA, 1.	0.752
ENSPREP00000011339	gtf2a2	ENSPREP00000011339	ENSPREP00000013132	TAF4 domain-containing protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.850
ENSPREP00000011339	taf10	ENSPREP00000011339	ENSPREP00000025580	TAF4 domain-containing protein.	TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.936
ENSPREP00000011339	taf13	ENSPREP00000011339	ENSPREP00000005745	TAF4 domain-containing protein.	TATA-box binding protein associated factor 13.	0.935
ENSPREP00000011339	taf3	ENSPREP00000011339	ENSPREP00000011483	TAF4 domain-containing protein.	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto.	0.903
ENSPREP00000011339	taf6	ENSPREP00000011339	ENSPREP00000033549	TAF4 domain-containing protein.	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.957
LOC103465090	ENSPREP00000011339	ENSPREP00000024331	ENSPREP00000011339	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF4 domain-containing protein.	0.900
LOC103465090	Taf12	ENSPREP00000024331	ENSPREP00000007202	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.957
LOC103465090	gtf2a1	ENSPREP00000024331	ENSPREP00000027319	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor.	General transcription factor IIA, 1.	0.752
LOC103465090	gtf2a2	ENSPREP00000024331	ENSPREP00000013132	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.850
LOC103465090	taf10	ENSPREP00000024331	ENSPREP00000025580	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.936
LOC103465090	taf13	ENSPREP00000024331	ENSPREP00000005745	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TATA-box binding protein associated factor 13.	0.935
LOC103465090	taf3	ENSPREP00000024331	ENSPREP00000011483	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto.	0.903
LOC103465090	taf6	ENSPREP00000024331	ENSPREP00000033549	TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.957
LOC103466384	Taf12	ENSPREP00000024912	ENSPREP00000007202	TAFH domain-containing protein.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.957
LOC103466384	gtf2a1	ENSPREP00000024912	ENSPREP00000027319	TAFH domain-containing protein.	General transcription factor IIA, 1.	0.752
LOC103466384	gtf2a2	ENSPREP00000024912	ENSPREP00000013132	TAFH domain-containing protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.850
LOC103466384	taf10	ENSPREP00000024912	ENSPREP00000025580	TAFH domain-containing protein.	TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.936