STRINGSTRING
casp6 casp6 ENSPREP00000030269 ENSPREP00000030269 ENSPREP00000030263 ENSPREP00000030263 ENSPREP00000030231 ENSPREP00000030231 gsdme gsdme ENSPREP00000031693 ENSPREP00000031693
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
casp6Caspase 6, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family. (312 aa)
ENSPREP00000030269Uncharacterized protein. (785 aa)
ENSPREP00000030263Uncharacterized protein. (812 aa)
ENSPREP00000030231Uncharacterized protein. (800 aa)
gsdmeGasdermin Eb. (448 aa)
ENSPREP00000031693Gasdermin domain-containing protein. (160 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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