STRINGSTRING
LOC103475931 LOC103475931 Six3 Six3 CDH2 CDH2 LOC103481539 LOC103481539 fgf2 fgf2 ascl1 ascl1 ENSPREP00000018776 ENSPREP00000018776 six6 six6 ENSPREP00000025759 ENSPREP00000025759 wnt4 wnt4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103475931SIX homeobox 7. (260 aa)
Six3SIX homeobox 3a. (341 aa)
CDH2Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins. (865 aa)
LOC103481539SIX homeobox 3b. (277 aa)
fgf2Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (155 aa)
ascl1Achaete-scute family bHLH transcription factor 1a. (200 aa)
ENSPREP00000018776Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (824 aa)
six6SIX homeobox 6a. (245 aa)
ENSPREP00000025759Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (332 aa)
wnt4Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (352 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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