STRINGSTRING
LOC103475636 LOC103475636 LOC103465118 LOC103465118 ENSPREP00000005440 ENSPREP00000005440 fmr1 fmr1 LOC103467950 LOC103467950 smc3 smc3 PAFAH1B1 PAFAH1B1 LOC103463079 LOC103463079 LOC103481190 LOC103481190 LOC103475415 LOC103475415 RAB29 RAB29 ppp1r42 ppp1r42 numa1 numa1 LOC103474427 LOC103474427 DCTN6-2 DCTN6-2 gpsm2 gpsm2 LOC103479306 LOC103479306 ENSPREP00000021545 ENSPREP00000021545 LOC103461055 LOC103461055 atmin atmin DCTN6 DCTN6 ENSPREP00000015401 ENSPREP00000015401 BICD2 BICD2 tpr tpr
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103475636Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family. (410 aa)
LOC103465118Bicaudal D homolog 2 (Drosophila). (818 aa)
ENSPREP00000005440Cilia and flagella associated protein 100. (432 aa)
fmr1Fragile X mental retardation 1. (273 aa)
LOC103467950Zgc:162200. (995 aa)
smc3Structural maintenance of chromosomes protein. (1225 aa)
PAFAH1B1Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family. (418 aa)
LOC103463079Uncharacterized protein. (704 aa)
LOC103481190Bicaudal D homolog 1a. (811 aa)
LOC103475415Uncharacterized protein. (470 aa)
RAB29RAB29, member RAS oncogene family. (206 aa)
ppp1r42Protein phosphatase 1, regulatory subunit 42. (291 aa)
numa1Calponin-homology (CH) domain-containing protein. (2143 aa)
LOC103474427Dynein assembly factor 1, axonemal. (582 aa)
DCTN6-2Dynactin subunit 6. (195 aa)
gpsm2Uncharacterized protein. (659 aa)
LOC103479306Translocated promoter region a, nuclear basket protein. (1861 aa)
ENSPREP00000021545Uncharacterized protein. (255 aa)
LOC103461055Fragile X mental retardation 1. (400 aa)
atminATM interactor. (796 aa)
DCTN6Dynactin subunit 6. (189 aa)
ENSPREP00000015401CENP-F_N domain-containing protein. (75 aa)
BICD2BICD cargo adaptor 2. (867 aa)
tprTranslocated promoter region b, nuclear basket protein. (2383 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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