STRINGSTRING
htr2a htr2a LOC103477155 LOC103477155 LOC103476211 LOC103476211 scp2 scp2 slc27a1 slc27a1 htr2b htr2b pdgfa pdgfa LOC103467002 LOC103467002 podn podn ENSPREP00000025671 ENSPREP00000025671 nr1h4 nr1h4 ENSPREP00000027807 ENSPREP00000027807 ENSPREP00000029374 ENSPREP00000029374 ENSPREP00000029606 ENSPREP00000029606 idh1 idh1 LOC103468546 LOC103468546
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
htr2a5-hydroxytryptamine (serotonin) receptor 2A, genome duplicate a. (496 aa)
LOC103477155Platelet-derived growth factor beta polypeptide a; Belongs to the PDGF/VEGF growth factor family. (560 aa)
LOC103476211Platelet-derived growth factor alpha polypeptide a; Belongs to the PDGF/VEGF growth factor family. (229 aa)
scp2Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (572 aa)
slc27a1Solute carrier family 27 member 1a. (648 aa)
htr2b5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled. (466 aa)
pdgfaPlatelet-derived growth factor alpha polypeptide b; Belongs to the PDGF/VEGF growth factor family. (228 aa)
LOC103467002Nuclear receptor subfamily 1, group H, member 5. (494 aa)
podnPodocan. (587 aa)
ENSPREP00000025671Lysophosphatidylcholine acyltransferase 1. (490 aa)
nr1h4Nuclear receptor subfamily 1, group H, member 4. (485 aa)
ENSPREP00000027807Platelet-derived growth factor beta polypeptide b; Belongs to the PDGF/VEGF growth factor family. (393 aa)
ENSPREP00000029374Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family. (380 aa)
ENSPREP00000029606G_PROTEIN_RECEP_F2_4 domain-containing protein. (267 aa)
idh1Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (414 aa)
LOC103468546PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family. (220 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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