12 items (Poecilia reticulata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	aqp1	Aquaporin 1a (Colton blood group), tandem duplicate 1; Belongs to the MIP/aquaporin (TC 1.A.8) family. (268 aa)
	pkd1	Polycystic kidney disease 1a. (4592 aa)
	ENSPREP00000001881	T-box transcription factor 2a. (572 aa)
	pkd2	Polycystic kidney disease 2. (893 aa)
	LOC103471028	COMM domain containing 5. (203 aa)
	ENSPREP00000006666	BHLH domain-containing protein. (76 aa)
	LOC103457458	Uncharacterized protein. (763 aa)
	ENSPREP00000010780	Aquaporin 1a (Colton blood group), tandem duplicate 1; Belongs to the MIP/aquaporin (TC 1.A.8) family. (176 aa)
	LOC103458981	Odd-skipped related transcription factor 1. (267 aa)
	LOC103476302	Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes. (271 aa)
	TBX2	T-box transcription factor 2. (686 aa)
	SIM1	SIM bHLH transcription factor 1a. (740 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000010780	LOC103476302	ENSPREP00000010780	ENSPREP00000021801	Aquaporin 1a (Colton blood group), tandem duplicate 1; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.	0.538
LOC103476302	ENSPREP00000010780	ENSPREP00000021801	ENSPREP00000010780	Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.	Aquaporin 1a (Colton blood group), tandem duplicate 1; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.538
LOC103476302	aqp1	ENSPREP00000021801	ENSPREP00000010725	Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.	Aquaporin 1a (Colton blood group), tandem duplicate 1; Belongs to the MIP/aquaporin (TC 1.A.8) family.	0.538
aqp1	LOC103476302	ENSPREP00000010725	ENSPREP00000021801	Aquaporin 1a (Colton blood group), tandem duplicate 1; Belongs to the MIP/aquaporin (TC 1.A.8) family.	Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.	0.538
pkd1	pkd2	ENSPREP00000000547	ENSPREP00000002383	Polycystic kidney disease 1a.	Polycystic kidney disease 2.	0.931
pkd2	pkd1	ENSPREP00000002383	ENSPREP00000000547	Polycystic kidney disease 2.	Polycystic kidney disease 1a.	0.931