(40 nodes) Cell-cell adhesion mediator activity network (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DSCAML1	DS cell adhesion molecule like 1. (2023 aa)
	LOC103474608	Down syndrome cell adhesion molecule like 1. (2091 aa)
	cntn2	Contactin 2. (1034 aa)
	LOC103460464	Contactin 3b. (1026 aa)
	LOC103481036	CDC42 effector protein (Rho GTPase binding) 1a. (363 aa)
	LOC103465395	Contactin 4. (1029 aa)
	LOC103465393	Uncharacterized protein. (1028 aa)
	LOC103467239	Contactin 3a, tandem duplicate 1. (981 aa)
	LOC103474387	Down syndrome cell adhesion molecule b. (2070 aa)
	LOC103467234	Contactin 3a, tandem duplicate 2. (1026 aa)
	LOC103466425	Uncharacterized protein. (380 aa)
	cntn5	Contactin 5. (1098 aa)
	nexn	Nexilin (F actin binding protein). (861 aa)
	LOC103466432	Si:ch73-330k17.3. (167 aa)
	ENSPREP00000019087	Ig-like domain-containing protein. (130 aa)
	ENSPREP00000019026	Uncharacterized protein. (273 aa)
	ENSPREP00000019013	Ig domain-containing protein. (210 aa)
	LOC103474593	Ig-like domain-containing protein. (340 aa)
	ENSPREP00000018977	Ig-like domain-containing protein. (244 aa)
	ENSPREP00000018959	Ig-like domain-containing protein. (239 aa)
	LOC103474808	Uncharacterized protein. (273 aa)
	robo3	Roundabout, axon guidance receptor, homolog 3 (Drosophila). (1474 aa)
	esam	Endothelial cell adhesion molecule a. (449 aa)
	LOC103476216	Junctional adhesion molecule 3b. (302 aa)
	gldn	Gliomedin. (576 aa)
	cntn1	Contactin 1b. (1040 aa)
	LOC103474209	Endothelial cell adhesion molecule b. (444 aa)
	LOC103479750	Vav 3 guanine nucleotide exchange factor b. (457 aa)
	jam3	Junctional adhesion molecule 3a. (306 aa)
	VSTM2L	V-set and transmembrane domain containing 2 like. (248 aa)
	epcam	Epithelial cell adhesion molecule. (309 aa)
	LOC103476139	Down syndrome cell adhesion molecule a. (2028 aa)
	ntng1	Netrin g1a. (527 aa)
	CNTN1	Contactin 1. (1041 aa)
	emb	Embigin. (302 aa)
	bsg	Basigin. (390 aa)
	LOC103462684	Neuroplastin b. (379 aa)
	LOC103480233	Ig-like domain-containing protein. (340 aa)
	ENSPREP00000003211	Uncharacterized protein. (307 aa)
	LOC103464942	V-set and transmembrane domain containing 2 like. (209 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CNTN1	cntn1	ENSPREP00000013907	ENSPREP00000016779	Contactin 1.	Contactin 1b.	0.902
DSCAML1	LOC103476139	ENSPREP00000031898	ENSPREP00000015397	DS cell adhesion molecule like 1.	Down syndrome cell adhesion molecule a.	0.413
LOC103474209	esam	ENSPREP00000016668	ENSPREP00000018256	Endothelial cell adhesion molecule b.	Endothelial cell adhesion molecule a.	0.901
LOC103474608	LOC103476139	ENSPREP00000033563	ENSPREP00000015397	Down syndrome cell adhesion molecule like 1.	Down syndrome cell adhesion molecule a.	0.413
LOC103476139	DSCAML1	ENSPREP00000015397	ENSPREP00000031898	Down syndrome cell adhesion molecule a.	DS cell adhesion molecule like 1.	0.413
LOC103476139	LOC103474608	ENSPREP00000015397	ENSPREP00000033563	Down syndrome cell adhesion molecule a.	Down syndrome cell adhesion molecule like 1.	0.413
LOC103476216	jam3	ENSPREP00000017917	ENSPREP00000016512	Junctional adhesion molecule 3b.	Junctional adhesion molecule 3a.	0.901
LOC103479750	ntng1	ENSPREP00000016634	ENSPREP00000015277	Vav 3 guanine nucleotide exchange factor b.	Netrin g1a.	0.901
cntn1	CNTN1	ENSPREP00000016779	ENSPREP00000013907	Contactin 1b.	Contactin 1.	0.902
esam	LOC103474209	ENSPREP00000018256	ENSPREP00000016668	Endothelial cell adhesion molecule a.	Endothelial cell adhesion molecule b.	0.901
jam3	LOC103476216	ENSPREP00000016512	ENSPREP00000017917	Junctional adhesion molecule 3a.	Junctional adhesion molecule 3b.	0.901
ntng1	LOC103479750	ENSPREP00000015277	ENSPREP00000016634	Netrin g1a.	Vav 3 guanine nucleotide exchange factor b.	0.901