STRINGSTRING
tgfbrap1 tgfbrap1 rint1 rint1 zw10 zw10 exoc8 exoc8 dnajc28 dnajc28 LOC103480609 LOC103480609 trappc9 trappc9 hook2 hook2 cog6 cog6 trappc8 trappc8 vps54 vps54 trappc6a trappc6a vps53 vps53 trappc3 trappc3 vps52 vps52 exoc1 exoc1 cog7 cog7 stx17 stx17 prc1 prc1 trappc13 trappc13 LOC103479813 LOC103479813 vps11 vps11 TRAPPC5 TRAPPC5 vps18 vps18 COG5 COG5 exoc3 exoc3 LOC103468969 LOC103468969 nbas nbas cog1 cog1 cog2 cog2 LOC103476194 LOC103476194 vps16 vps16 exoc5 exoc5 exoc2 exoc2 vps33a vps33a trappc1 trappc1 vps39 vps39 exoc7 exoc7 cog8 cog8 vps8 vps8 stxbp6 stxbp6 vps41 vps41 exoc3l4 exoc3l4 tnfaip2 tnfaip2 vps51 vps51 trappc10 trappc10 ENSPREP00000005683 ENSPREP00000005683 trappc4 trappc4 exoc4 exoc4 trappc12 trappc12 exoc6 exoc6 LOC103475299 LOC103475299 LOC103466291 LOC103466291 ENSPREP00000003185 ENSPREP00000003185 rnf215 rnf215 cog3 cog3 MAP11 MAP11 trappc2 trappc2 ENSPREP00000002127 ENSPREP00000002127 cog4 cog4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tgfbrap1Transforming growth factor, beta receptor associated protein 1. (876 aa)
rint1RAD50 interactor 1. (787 aa)
zw10Zw10 kinetochore protein. (767 aa)
exoc8Exocyst complex component 8. (685 aa)
dnajc28DnaJ (Hsp40) homolog, subfamily C, member 28. (385 aa)
LOC103480609Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (809 aa)
trappc9Trafficking protein particle complex 9. (1092 aa)
hook2Hook microtubule-tethering protein 2. (666 aa)
cog6Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. (651 aa)
trappc8Trafficking protein particle complex 8. (1454 aa)
vps54VPS54 subunit of GARP complex. (1027 aa)
trappc6aTrafficking protein particle complex 6b-like. (192 aa)
vps53VPS53 subunit of GARP complex. (832 aa)
trappc3Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (180 aa)
vps52VPS52 subunit of GARP complex. (574 aa)
exoc1Exocyst complex component 1. (927 aa)
cog7Component of oligomeric golgi complex 7. (767 aa)
stx17t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (304 aa)
prc1VPS33B late endosome and lysosome associated; Belongs to the STXBP/unc-18/SEC1 family. (613 aa)
trappc13Trafficking protein particle complex 13. (388 aa)
LOC103479813Si:ch211-106h4.9. (986 aa)
vps11Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family. (928 aa)
TRAPPC5Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (188 aa)
vps18VPS18 core subunit of CORVET and HOPS complexes. (982 aa)
COG5Component of oligomeric golgi complex 5. (779 aa)
exoc3Exocyst complex component 3. (750 aa)
LOC103468969Si:dkey-245p14.4. (189 aa)
nbasNeuroblastoma amplified sequence. (2365 aa)
cog1Component of oligomeric golgi complex 1. (988 aa)
cog2Component of oligomeric golgi complex 2. (742 aa)
LOC103476194Exocyst complex component 3-like 2a. (931 aa)
vps16Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. (834 aa)
exoc5Exocyst complex component 5. (707 aa)
exoc2Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. (939 aa)
vps33aVPS33A core subunit of CORVET and HOPS complexes; Belongs to the STXBP/unc-18/SEC1 family. (600 aa)
trappc1Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (145 aa)
vps39VPS39 subunit of HOPS complex. (876 aa)
exoc7Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (716 aa)
cog8Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family. (625 aa)
vps8VPS8 subunit of CORVET complex. (1325 aa)
stxbp6Syntaxin binding protein 6 (amisyn). (210 aa)
vps41Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family. (846 aa)
exoc3l4Exocyst complex component 3-like 4. (764 aa)
tnfaip2Uncharacterized protein. (644 aa)
vps51VPS51 subunit of GARP complex. (826 aa)
trappc10Trafficking protein particle complex 10. (837 aa)
ENSPREP00000005683Uncharacterized protein. (343 aa)
trappc4Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (219 aa)
exoc4Exocyst complex component 4. (994 aa)
trappc12Trafficking protein particle complex 12. (816 aa)
exoc6Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (829 aa)
LOC103475299Exocyst complex component 3-like 2b. (874 aa)
LOC103466291Exocyst complex component 3-like 1. (778 aa)
ENSPREP00000003185Uncharacterized protein. (211 aa)
rnf215Ring finger protein 215. (364 aa)
cog3Component of oligomeric golgi complex 3. (833 aa)
MAP11Microtubule associated protein 11. (605 aa)
trappc2Trafficking protein particle complex 2. (141 aa)
ENSPREP00000002127RabBD domain-containing protein. (192 aa)
cog4Component of oligomeric golgi complex 4. (773 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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