STRINGSTRING
alkbh5 alkbh5 frg1 frg1 LOC103475290 LOC103475290 LOC103464091 LOC103464091 LOC103464681 LOC103464681 ENSPREP00000000945 ENSPREP00000000945 ankrd1 ankrd1 ENSPREP00000001288 ENSPREP00000001288 Morc3 Morc3 ENSPREP00000001364 ENSPREP00000001364 ENSPREP00000001423 ENSPREP00000001423 nudt21 nudt21 LOC103466359 LOC103466359 fastk fastk noc3l noc3l casp8ap2 casp8ap2 PTEN PTEN nt5dc1 nt5dc1 sumo2 sumo2 ENSPREP00000002908 ENSPREP00000002908 LOC103480162 LOC103480162 LOC103464909 LOC103464909 setbp1 setbp1 LOC103464577 LOC103464577 LOC103462255 LOC103462255 csnk1a1 csnk1a1 LOC103462257 LOC103462257 dhx36 dhx36 LOC103475923 LOC103475923 srsf2 srsf2 trim8 trim8 LOC103480200 LOC103480200 ENSPREP00000005981 ENSPREP00000005981 SRSF3 SRSF3 smu1 smu1 LOC103471211 LOC103471211 fam118b fam118b LOC103460651 LOC103460651 ddx46 ddx46 NR3C1 NR3C1 wtap wtap LOC103470482 LOC103470482 srsf11 srsf11 fyttd1 fyttd1 lsg1 lsg1 LOC103458735 LOC103458735 fto fto LOC103471188 LOC103471188 Coil Coil SMU1 SMU1 crebbp crebbp blm blm prpf31 prpf31 tdp2 tdp2 glis2 glis2 srsf10 srsf10 LOC103457395 LOC103457395 LOC103465105 LOC103465105 ice2 ice2 SRSF11 SRSF11 nrde2 nrde2 LOC103461674 LOC103461674 ZNF830 ZNF830 LOC103458235 LOC103458235 LOC103480378 LOC103480378 LOC103471620 LOC103471620 LOC103474154 LOC103474154 LOC103473063 LOC103473063 nsrp1 nsrp1 Nono Nono RPA1 RPA1 arih1 arih1 LOC103474198 LOC103474198 uspl1 uspl1 LOC103457348 LOC103457348 zc3h13 zc3h13 ak6 ak6 DGKQ DGKQ rnf4 rnf4 ddx1 ddx1 LOC103474226 LOC103474226 rpain rpain rdm1 rdm1 smndc1 smndc1 akap17a akap17a LOC103473138 LOC103473138 LOC103460229 LOC103460229 Calcoco2 Calcoco2 RAD54L2 RAD54L2 phax phax wt1 wt1 HSF1 HSF1 DDX39A DDX39A LOC103476793 LOC103476793 apex1 apex1 Zpr1 Zpr1 rbm15 rbm15 LOC103475515 LOC103475515 tcim tcim wrap53 wrap53 klhl20 klhl20 zbtb16 zbtb16 LOC103468401 LOC103468401 wbp11 wbp11 pnisr pnisr HABP4 HABP4 ENSPREP00000023914 ENSPREP00000023914 chek2 chek2 ENSPREP00000024075 ENSPREP00000024075 poldip3 poldip3 LOC103474391 LOC103474391 LOC103467943 LOC103467943 LOC103475485 LOC103475485 ythdc1 ythdc1 ddx39a ddx39a LOC103477214 LOC103477214 ENSPREP00000026680 ENSPREP00000026680 srsf5 srsf5 fbl fbl tp53inp1 tp53inp1 nagpa nagpa tp53inp2 tp53inp2 hsf4 hsf4 wbp4 wbp4 DDX5 DDX5 n4bp1 n4bp1 Srpk2 Srpk2 ENSPREP00000028294 ENSPREP00000028294 ENSPREP00000028306 ENSPREP00000028306 ppargc1a ppargc1a chfr chfr zc3h18 zc3h18 rnf6 rnf6 inppl1 inppl1 zc3h14 zc3h14 ENSPREP00000028963 ENSPREP00000028963 scnm1 scnm1 Srek1 Srek1 ENSPREP00000029428 ENSPREP00000029428 tut1 tut1 basp1 basp1 LOC103476933 LOC103476933 ewsr1 ewsr1 fam76b fam76b mlip mlip LOC103474722 LOC103474722 srpk1 srpk1 gemin7 gemin7 hinfp hinfp ENSPREP00000034242 ENSPREP00000034242 rnf111 rnf111
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
alkbh5AlkB homolog 5, RNA demethylase. (358 aa)
frg1FSHD region gene 1. (267 aa)
LOC103475290GLIS family zinc finger 2a. (511 aa)
LOC103464091CREB binding protein a. (2371 aa)
LOC103464681DEAD-box helicase 17; Belongs to the DEAD box helicase family. (651 aa)
ENSPREP00000000945Uncharacterized protein. (163 aa)
ankrd1Ankyrin repeat domain 1a (cardiac muscle). (302 aa)
ENSPREP00000001288Uncharacterized protein. (203 aa)
Morc3Uncharacterized protein. (160 aa)
ENSPREP00000001364RRM domain-containing protein. (246 aa)
ENSPREP00000001423Serine and arginine rich splicing factor 6a. (149 aa)
nudt21Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (229 aa)
LOC103466359WT1 transcription factor a. (356 aa)
fastkFas-activated serine/threonine kinase. (886 aa)
noc3lNOC3-like DNA replication regulator. (1039 aa)
casp8ap2Uncharacterized protein. (1829 aa)
PTENPhosphatase and tensin homolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family. (412 aa)
nt5dc15'-nucleotidase domain containing 1. (459 aa)
sumo2Small ubiquitin-related modifier. (95 aa)
ENSPREP00000002908Uncharacterized protein. (346 aa)
LOC103480162RNA binding motif protein 4.3. (324 aa)
LOC103464909SRSF protein kinase 1b. (658 aa)
setbp1SET binding protein 1. (1512 aa)
LOC103464577RRM domain-containing protein. (160 aa)
LOC103462255Zgc:162297. (271 aa)
csnk1a1Casein kinase 1, alpha 1; Belongs to the protein kinase superfamily. (365 aa)
LOC103462257Si:ch211-260e23.9. (169 aa)
dhx36DEAH (Asp-Glu-Ala-His) box polypeptide 36. (1057 aa)
LOC103475923Uncharacterized protein. (607 aa)
srsf2Serine and arginine rich splicing factor 2a. (236 aa)
trim8Tripartite motif containing 8b. (595 aa)
LOC103480200RNA binding motif protein 4.2. (376 aa)
ENSPREP00000005981Uncharacterized protein. (828 aa)
SRSF3Serine and arginine rich splicing factor 3. (125 aa)
smu1SMU1 DNA replication regulator and spliceosomal factor b. (511 aa)
LOC103471211Nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor). (765 aa)
fam118bFamily with sequence similarity 118 member B. (358 aa)
LOC103460651Cwf21 domain-containing protein. (965 aa)
ddx46DEAD (Asp-Glu-Ala-Asp) box polypeptide 46. (1071 aa)
NR3C1Nuclear receptor subfamily 3 group C member 1. (745 aa)
wtapWT1 associated protein. (421 aa)
LOC103470482Survival of motor neuron 1, telomeric. (308 aa)
srsf11Serine and arginine rich splicing factor 11. (459 aa)
fyttd1Uncharacterized protein. (321 aa)
lsg1Large 60S subunit nuclear export GTPase 1. (613 aa)
LOC103458735Small ubiquitin-related modifier. (94 aa)
ftoFTO alpha-ketoglutarate dependent dioxygenase. (696 aa)
LOC103471188Germ cell nuclear acidic peptidase. (437 aa)
CoilCoilin_N domain-containing protein. (104 aa)
SMU1SMU1 DNA replication regulator and spliceosomal factor. (527 aa)
crebbpCREB binding protein b. (2452 aa)
blmBLM RecQ like helicase. (1399 aa)
prpf31PRP31 pre-mRNA processing factor 31 homolog (yeast). (508 aa)
tdp2Tyrosyl-DNA phosphodiesterase 2b. (359 aa)
glis2GLIS family zinc finger 2b. (525 aa)
srsf10RRM domain-containing protein. (187 aa)
LOC103457395RNA binding motif protein 25b. (829 aa)
LOC103465105RAD54 like 2. (1345 aa)
ice2Interactor of little elongator complex ELL subunit 2. (907 aa)
SRSF11Serine and arginine rich splicing factor 11. (453 aa)
nrde2NRDE-2, necessary for RNA interference, domain containing. (1204 aa)
LOC103461674Ubiquitin-like domain-containing protein. (161 aa)
ZNF830Zinc finger protein 830. (333 aa)
LOC103458235RNA binding motif protein 25a. (859 aa)
LOC103480378KH and NYN domain containing. (1015 aa)
LOC103471620Inositol polyphosphate phosphatase-like 1b. (1151 aa)
LOC103474154Serine and arginine rich splicing factor 1a. (251 aa)
LOC103473063Serine and arginine rich splicing factor 4. (352 aa)
nsrp1Nuclear speckle splicing regulatory protein 1. (477 aa)
NonoNon-POU domain containing, octamer-binding. (443 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (674 aa)
arih1RBR-type E3 ubiquitin transferase. (528 aa)
LOC103474198Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (537 aa)
uspl1Ubiquitin specific peptidase like 1. (1005 aa)
LOC103457348Serine and arginine rich splicing factor 5b. (301 aa)
zc3h13Zinc finger CCCH-type containing 13. (1800 aa)
ak6Adenylate kinase isoenzyme 6; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. May have a role in nuclear energy homeostasis. Has also ATPase activity. May be involved in regulation of Cajal body (CB) formation; Belongs to the adenylate kinase family. AK6 subfamily. (173 aa)
DGKQDiacylglycerol kinase. (895 aa)
rnf4RING-type domain-containing protein. (191 aa)
ddx1DEAD (Asp-Glu-Ala-Asp) box helicase 1. (740 aa)
LOC103474226Zgc:112083. (510 aa)
rpainRPA interacting protein. (274 aa)
rdm1Zgc:103564. (271 aa)
smndc1Survival motor neuron domain containing 1. (238 aa)
akap17aA kinase (PRKA) anchor protein 17A. (645 aa)
LOC103473138Dual specificity phosphatase 11 (RNA/RNP complex 1-interacting). (386 aa)
LOC103460229SRSF protein kinase 3. (840 aa)
Calcoco2SKICH domain-containing protein. (143 aa)
RAD54L2RAD54 like 2. (1468 aa)
phaxPhosphorylated adaptor for RNA export. (419 aa)
wt1WT1 transcription factor b. (490 aa)
HSF1Heat shock transcription factor 1. (511 aa)
DDX39ADExD-box helicase 39A. (427 aa)
LOC103476793Phosphatase and tensin homolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family. (422 aa)
apex1DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (311 aa)
Zpr1ZPR1 zinc finger. (446 aa)
rbm15RNA binding motif protein 15. (844 aa)
LOC103475515Transmembrane phosphatase with tensin homology. (512 aa)
tcimTranscriptional and immune response regulator a. (100 aa)
wrap53WD repeat containing, antisense to TP53. (545 aa)
klhl20Kelch-like family member 20. (609 aa)
zbtb16Zinc finger and BTB domain containing 16a. (664 aa)
LOC103468401DEAD (Asp-Glu-Ala-Asp) box helicase 5; Belongs to the DEAD box helicase family. (636 aa)
wbp11WW domain binding protein 11. (696 aa)
pnisrUncharacterized protein. (832 aa)
HABP4Hyaluronan binding protein 4. (361 aa)
ENSPREP00000023914TYR_PHOSPHATASE_2 domain-containing protein. (174 aa)
chek2Checkpoint kinase 2. (510 aa)
ENSPREP00000024075Morc6_S5 domain-containing protein. (305 aa)
poldip3Polymerase (DNA-directed), delta interacting protein 3. (494 aa)
LOC103474391LisH domain-containing protein. (1307 aa)
LOC103467943Small ubiquitin-related modifier. (96 aa)
LOC103475485Uncharacterized protein. (248 aa)
ythdc1YTH domain containing 1. (602 aa)
ddx39aUncharacterized protein. (427 aa)
LOC103477214Uncharacterized protein. (951 aa)
ENSPREP00000026680H1 histone family, member 0. (195 aa)
srsf5Serine and arginine rich splicing factor 5a. (317 aa)
fblFibrillarin. (310 aa)
tp53inp1Tumor protein p53 inducible nuclear protein 1. (298 aa)
nagpaN-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase. (594 aa)
tp53inp2Uncharacterized protein. (287 aa)
hsf4Heat shock transcription factor 4. (450 aa)
wbp4Uncharacterized protein. (433 aa)
DDX5DEAD-box helicase 5; Belongs to the DEAD box helicase family. (636 aa)
n4bp1Nedd4 binding protein 1. (818 aa)
Srpk2Protein kinase domain-containing protein. (168 aa)
ENSPREP00000028294Uncharacterized protein. (130 aa)
ENSPREP00000028306NACHT domain-containing protein. (785 aa)
ppargc1aPeroxisome proliferator-activated receptor gamma, coactivator 1 alpha. (1284 aa)
chfrCheckpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase. (624 aa)
zc3h18Zinc finger CCCH-type containing 18. (1031 aa)
rnf6Ring finger protein (C3H2C3 type) 6. (589 aa)
inppl1Inositol polyphosphate phosphatase-like 1a. (1248 aa)
zc3h14Zinc finger CCCH-type containing 14. (674 aa)
ENSPREP00000028963SAP domain containing ribonucleoprotein. (222 aa)
scnm1Sodium channel modifier 1. (291 aa)
Srek1Splicing regulatory glutamine/lysine-rich protein 1. (171 aa)
ENSPREP00000029428RRM domain-containing protein. (125 aa)
tut1Terminal uridylyl transferase 1, U6 snRNA-specific. (777 aa)
basp1Brain abundant, membrane attached signal protein 1. (212 aa)
LOC103476933RING-type domain-containing protein. (561 aa)
ewsr1EWS RNA-binding protein 1b. (640 aa)
fam76bFamily with sequence similarity 76 member B. (336 aa)
mlipUncharacterized protein. (848 aa)
LOC103474722Uncharacterized protein. (272 aa)
srpk1SRSF protein kinase 1a. (675 aa)
gemin7Gem (nuclear organelle) associated protein 7. (128 aa)
hinfpHistone H4 transcription factor. (489 aa)
ENSPREP00000034242Uncharacterized protein. (694 aa)
rnf111Ring finger protein 111. (982 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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