STRINGSTRING
ergic1 ergic1 LOC103479366 LOC103479366 tm6sf2 tm6sf2 LOC103479084 LOC103479084 ENSPREP00000010743 ENSPREP00000010743 tmed2 tmed2 LOC103466072 LOC103466072 mppe1 mppe1 TMED6 TMED6 LOC103470198 LOC103470198 WHAMM WHAMM VPS13B VPS13B ergic3 ergic3 plpp3 plpp3 LOC103459111 LOC103459111 ENSPREP00000010775 ENSPREP00000010775 LOC103466626 LOC103466626 ENSPREP00000013240 ENSPREP00000013240 ENSPREP00000013249 ENSPREP00000013249 LOC103463624 LOC103463624 LAMP5 LAMP5 LOC103462486 LOC103462486 LOC103463777 LOC103463777 tmed1 tmed1 LOC103462181 LOC103462181
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ergic1Endoplasmic reticulum-golgi intermediate compartment 1. (291 aa)
LOC103479366TRIF-NTD domain-containing protein. (564 aa)
tm6sf2Transmembrane 6 superfamily member 2. (385 aa)
LOC103479084SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family. (215 aa)
ENSPREP00000010743Si:ch211-195e19.1. (222 aa)
tmed2Transmembrane p24 trafficking protein 2. (207 aa)
LOC103466072ERGIC and golgi 2. (336 aa)
mppe1Metallophosphoesterase 1. (393 aa)
TMED6Transmembrane p24 trafficking protein 6. (241 aa)
LOC103470198Transmembrane p24 trafficking protein 7. (216 aa)
WHAMMWASP homolog associated with actin, golgi membranes and microtubules. (712 aa)
VPS13BVacuolar protein sorting 13 homolog B. (3878 aa)
ergic3ERGIC and golgi 3. (389 aa)
plpp3Phospholipid phosphatase 3. (313 aa)
LOC103459111Uncharacterized protein. (373 aa)
ENSPREP00000010775Si:ch211-195e19.1. (217 aa)
LOC103466626Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (452 aa)
ENSPREP00000013240GOLD domain-containing protein. (162 aa)
ENSPREP00000013249Transmembrane p24 trafficking protein 3. (120 aa)
LOC103463624SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family. (220 aa)
LAMP5Lysosomal associated membrane protein family member 5. (269 aa)
LOC103462486Transmembrane p24 trafficking protein 1b. (234 aa)
LOC103463777Transmembrane p24 trafficking protein 5. (229 aa)
tmed1Transmembrane p24 trafficking protein 1a. (225 aa)
LOC103462181Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (455 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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