STRINGSTRING
slf1 slf1 nup153 nup153 LOC103467593 LOC103467593 atxn1 atxn1 pabpn1 pabpn1 atxn3 atxn3 stub1 stub1 LOC103478620 LOC103478620
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
slf1SMC5-SMC6 complex localization factor 1. (880 aa)
nup153Nucleoporin 153. (1518 aa)
LOC103467593AXH domain-containing protein. (675 aa)
atxn1Ataxin 1a. (795 aa)
pabpn1Poly(A) binding protein, nuclear 1. (286 aa)
atxn3Ataxin 3. (377 aa)
stub1STIP1 homology and U-Box containing protein 1. (286 aa)
LOC103478620Ataxin 1b. (825 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (16%) [HD]