(27 nodes) Perikaryon network (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	glra1	Glycine receptor, alpha 1; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (446 aa)
	LOC103456731	Disco-interacting protein 2 homolog Cb. (1635 aa)
	kcnk1	Potassium channel subfamily K member. (336 aa)
	sirt2	NAD-dependent protein deacetylase; NAD-dependent protein deacetylase. (385 aa)
	LOC103476699	Opioid receptor, mu 1; Belongs to the G-protein coupled receptor 1 family. (384 aa)
	dip2a	Disco-interacting protein 2 homolog A. (1633 aa)
	LOC103463374	Regulator of G protein signaling 8. (221 aa)
	ngb	GLOBIN domain-containing protein; Belongs to the globin family. (176 aa)
	rogdi	Rogdi atypical leucine zipper. (290 aa)
	LOC103481558	Potassium channel subfamily K member. (352 aa)
	ENSPREP00000017681	Ion_trans domain-containing protein; Belongs to the potassium channel family. (658 aa)
	glra3	Glycine receptor, alpha 3; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (468 aa)
	dhx36	DEAH (Asp-Glu-Ala-His) box polypeptide 36. (1057 aa)
	atoh7	Atonal bHLH transcription factor 7. (133 aa)
	LOC103470076	Uncharacterized protein. (381 aa)
	ENSPREP00000019151	BTB domain-containing protein. (197 aa)
	rufy3	RUN and FYVE domain containing 3. (660 aa)
	ENSPREP00000019994	Uncharacterized protein. (95 aa)
	LOC103465364	Disco-interacting protein 2 homolog Bb. (1631 aa)
	chat	Choline O-acetyltransferase a; Belongs to the carnitine/choline acetyltransferase family. (676 aa)
	LOC103471360	Reticulon 4 receptor-like 2b. (463 aa)
	kcnb2	Potassium voltage-gated channel subfamily B member 2; Belongs to the potassium channel family. (838 aa)
	crhbp	Corticotropin-releasing factor-binding protein; Binds CRF and inactivates it. May prevent inappropriate pituitary-adrenal stimulation in pregnancy. Belongs to the CRF-binding protein family. (323 aa)
	dip2c	Disco interacting protein 2 homolog C. (1520 aa)
	ptpn5	Protein tyrosine phosphatase non-receptor type 5. (570 aa)
	LOC103467925	Disco-interacting protein 2 homolog Ba. (1316 aa)
	LOC103481435	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (633 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000017681	ENSPREP00000019151	ENSPREP00000017681	ENSPREP00000019151	Ion_trans domain-containing protein; Belongs to the potassium channel family.	BTB domain-containing protein.	0.665
ENSPREP00000019151	ENSPREP00000017681	ENSPREP00000019151	ENSPREP00000017681	BTB domain-containing protein.	Ion_trans domain-containing protein; Belongs to the potassium channel family.	0.665
LOC103481435	chat	ENSPREP00000001595	ENSPREP00000026282	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.	Choline O-acetyltransferase a; Belongs to the carnitine/choline acetyltransferase family.	0.901
chat	LOC103481435	ENSPREP00000026282	ENSPREP00000001595	Choline O-acetyltransferase a; Belongs to the carnitine/choline acetyltransferase family.	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.	0.901