STRINGSTRING
LOC103476014 LOC103476014 rom1 rom1 LOC103477409 LOC103477409 LOC103457115 LOC103457115 LOC103458995 LOC103458995 prph2 prph2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103476014Retinal outer segment membrane protein 1a. (347 aa)
rom1Retinal outer segment membrane protein 1b. (361 aa)
LOC103477409Peripherin 2b (retinal degeneration, slow). (344 aa)
LOC103457115Uncharacterized protein. (356 aa)
LOC103458995Peripherin 2-like a. (366 aa)
prph2Peripherin 2a (retinal degeneration, slow). (344 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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