(19 nodes) Macro domain network (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSPREP00000028501	Poly [ADP-ribose] polymerase. (672 aa)
	ENSPREP00000028349	Poly [ADP-ribose] polymerase. (720 aa)
	LOC103461817	Uncharacterized protein. (797 aa)
	chd1l	Chromodomain helicase DNA binding protein 1-like. (867 aa)
	ENSPREP00000025444	Poly [ADP-ribose] polymerase. (1527 aa)
	oard1	O-acyl-ADP-ribose deacylase 1. (210 aa)
	LOC103480296	Poly [ADP-ribose] polymerase. (1590 aa)
	ENSPREP00000010946	Poly [ADP-ribose] polymerase. (303 aa)
	ENSPREP00000009937	Macro domain-containing protein. (276 aa)
	LOC103480273	Uncharacterized protein. (743 aa)
	gdap2	Ganglioside induced differentiation associated protein 2. (496 aa)
	ENSPREP00000025112	Macro domain-containing protein. (173 aa)
	macrod1	Mono-ADP ribosylhydrolase 1. (366 aa)
	ENSPREP00000009110	Macro domain-containing protein. (171 aa)
	LOC103476165	Uncharacterized protein. (1113 aa)
	ENSPREP00000018054	Macro domain-containing protein. (113 aa)
	ENSPREP00000015009	Macro domain-containing protein. (145 aa)
	LOC103460017	H2A histone family, member Y; Belongs to the histone H2A family. (336 aa)
	ENSPREP00000028585	Macro domain-containing protein. (508 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000009937	ENSPREP00000010946	ENSPREP00000009937	ENSPREP00000010946	Macro domain-containing protein.	Poly [ADP-ribose] polymerase.	0.512
ENSPREP00000010946	ENSPREP00000009937	ENSPREP00000010946	ENSPREP00000009937	Poly [ADP-ribose] polymerase.	Macro domain-containing protein.	0.512
ENSPREP00000010946	ENSPREP00000028585	ENSPREP00000010946	ENSPREP00000028585	Poly [ADP-ribose] polymerase.	Macro domain-containing protein.	0.889
ENSPREP00000010946	LOC103476165	ENSPREP00000010946	ENSPREP00000005114	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.523
ENSPREP00000025444	LOC103461817	ENSPREP00000025444	ENSPREP00000028279	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.448
ENSPREP00000028349	LOC103461817	ENSPREP00000028349	ENSPREP00000028279	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.494
ENSPREP00000028349	gdap2	ENSPREP00000028349	ENSPREP00000028766	Poly [ADP-ribose] polymerase.	Ganglioside induced differentiation associated protein 2.	0.501
ENSPREP00000028501	LOC103461817	ENSPREP00000028501	ENSPREP00000028279	Poly [ADP-ribose] polymerase.	Uncharacterized protein.	0.491
ENSPREP00000028585	ENSPREP00000010946	ENSPREP00000028585	ENSPREP00000010946	Macro domain-containing protein.	Poly [ADP-ribose] polymerase.	0.889
ENSPREP00000028585	LOC103461817	ENSPREP00000028585	ENSPREP00000028279	Macro domain-containing protein.	Uncharacterized protein.	0.501
LOC103460017	chd1l	ENSPREP00000008313	ENSPREP00000026478	H2A histone family, member Y; Belongs to the histone H2A family.	Chromodomain helicase DNA binding protein 1-like.	0.638
LOC103461817	ENSPREP00000025444	ENSPREP00000028279	ENSPREP00000025444	Uncharacterized protein.	Poly [ADP-ribose] polymerase.	0.448
LOC103461817	ENSPREP00000028349	ENSPREP00000028279	ENSPREP00000028349	Uncharacterized protein.	Poly [ADP-ribose] polymerase.	0.494
LOC103461817	ENSPREP00000028501	ENSPREP00000028279	ENSPREP00000028501	Uncharacterized protein.	Poly [ADP-ribose] polymerase.	0.491
LOC103461817	ENSPREP00000028585	ENSPREP00000028279	ENSPREP00000028585	Uncharacterized protein.	Macro domain-containing protein.	0.501
LOC103461817	gdap2	ENSPREP00000028279	ENSPREP00000028766	Uncharacterized protein.	Ganglioside induced differentiation associated protein 2.	0.451
LOC103476165	ENSPREP00000010946	ENSPREP00000005114	ENSPREP00000010946	Uncharacterized protein.	Poly [ADP-ribose] polymerase.	0.523
chd1l	LOC103460017	ENSPREP00000026478	ENSPREP00000008313	Chromodomain helicase DNA binding protein 1-like.	H2A histone family, member Y; Belongs to the histone H2A family.	0.638
gdap2	ENSPREP00000028349	ENSPREP00000028766	ENSPREP00000028349	Ganglioside induced differentiation associated protein 2.	Poly [ADP-ribose] polymerase.	0.501
gdap2	LOC103461817	ENSPREP00000028766	ENSPREP00000028279	Ganglioside induced differentiation associated protein 2.	Uncharacterized protein.	0.451