STRINGSTRING
ptcd3 ptcd3 LOC103462163 LOC103462163 dennd4c dennd4c ptcd2 ptcd2 Mrps27 Mrps27 DENND4A DENND4A dennd4a dennd4a polrmt polrmt lrpprc lrpprc
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ptcd3Pentatricopeptide repeat domain 3. (549 aa)
LOC103462163Pentatricopeptide repeat domain 1. (693 aa)
dennd4cDENN/MADD domain containing 4C. (1779 aa)
ptcd2Pentatricopeptide repeat domain 2. (391 aa)
Mrps27Mitochondrial ribosomal protein S27. (195 aa)
DENND4ADENN domain containing 4A. (1603 aa)
dennd4aDENN/MADD domain containing 4A. (1685 aa)
polrmtDNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (1322 aa)
lrpprcLeucine-rich pentatricopeptide repeat containing. (1421 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (38%) [HD]