STRINGSTRING
ogdh ogdh LOC103467440 LOC103467440 bckdhb bckdhb ENSPREP00000014189 ENSPREP00000014189 LOC103465119 LOC103465119 TKT TKT
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ogdhOxoglutarate (alpha-ketoglutarate) dehydrogenase b (lipoamide). (1019 aa)
LOC103467440Transketolase b. (626 aa)
bckdhbBranched chain keto acid dehydrogenase E1 subunit beta. (387 aa)
ENSPREP00000014189Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (202 aa)
LOC103465119Transketolase a. (652 aa)
TKTTransketolase. (629 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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