STRINGSTRING
ifih1 ifih1 LOC103479258 LOC103479258 dhx58 dhx58 UPF1 UPF1 dicer1 dicer1 fancm fancm ercc3 ercc3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ifih1Interferon induced with helicase C domain 1. (969 aa)
LOC103479258Uncharacterized protein. (1109 aa)
dhx58DEXH (Asp-Glu-X-His) box polypeptide 58. (681 aa)
UPF1UPF1 RNA helicase and ATPase. (1097 aa)
dicer1Dicer 1, ribonuclease type III; Belongs to the helicase family. Dicer subfamily. (1860 aa)
fancmUncharacterized protein. (1901 aa)
ercc3Excision repair cross-complementation group 3. (783 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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