(6 nodes) Gamma-adaptin ear (GAE) domain network (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	gga3	Golgi associated, gamma adaptin ear containing, ARF binding protein 3a. (742 aa)
	LOC103481937	Uncharacterized protein. (617 aa)
	ap1g1	AP-1 complex subunit gamma. (785 aa)
	LOC103478890	AP-1 complex subunit gamma. (794 aa)
	GGA1	Golgi associated, gamma adaptin ear containing, ARF binding protein 1. (642 aa)
	LOC103464672	Uncharacterized protein. (647 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GGA1	gga3	ENSPREP00000024949	ENSPREP00000024595	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.	0.440
LOC103464672	gga3	ENSPREP00000000682	ENSPREP00000024595	Uncharacterized protein.	Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.	0.442
LOC103478890	ap1g1	ENSPREP00000032499	ENSPREP00000034290	AP-1 complex subunit gamma.	AP-1 complex subunit gamma.	0.901
LOC103478890	gga3	ENSPREP00000032499	ENSPREP00000024595	AP-1 complex subunit gamma.	Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.	0.510
LOC103481937	gga3	ENSPREP00000000166	ENSPREP00000024595	Uncharacterized protein.	Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.	0.432
ap1g1	LOC103478890	ENSPREP00000034290	ENSPREP00000032499	AP-1 complex subunit gamma.	AP-1 complex subunit gamma.	0.901
ap1g1	gga3	ENSPREP00000034290	ENSPREP00000024595	AP-1 complex subunit gamma.	Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.	0.510
gga3	GGA1	ENSPREP00000024595	ENSPREP00000024949	Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	0.440
gga3	LOC103464672	ENSPREP00000024595	ENSPREP00000000682	Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.	Uncharacterized protein.	0.442
gga3	LOC103478890	ENSPREP00000024595	ENSPREP00000032499	Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.	AP-1 complex subunit gamma.	0.510
gga3	LOC103481937	ENSPREP00000024595	ENSPREP00000000166	Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.	Uncharacterized protein.	0.432
gga3	ap1g1	ENSPREP00000024595	ENSPREP00000034290	Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.	AP-1 complex subunit gamma.	0.510