(14 nodes) MAD homology, MH1 network (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103473773	Mothers against decapentaplegic homolog. (503 aa)
	LOC103466539	Mothers against decapentaplegic homolog. (425 aa)
	smad6	Mothers against decapentaplegic homolog. (497 aa)
	LOC103471035	Mothers against decapentaplegic homolog. (475 aa)
	smad2	Mothers against decapentaplegic homolog. (410 aa)
	ENSPREP00000009749	MH1 domain-containing protein. (71 aa)
	SMAD3	Mothers against decapentaplegic homolog. (425 aa)
	LOC103462100	Mothers against decapentaplegic homolog. (332 aa)
	smad1	Mothers against decapentaplegic homolog. (467 aa)
	SMAD4	Mothers against decapentaplegic homolog. (439 aa)
	smad7	Mothers against decapentaplegic homolog. (378 aa)
	LOC103469777	Mothers against decapentaplegic homolog. (467 aa)
	LOC103477474	Mothers against decapentaplegic homolog. (534 aa)
	smad9	Mothers against decapentaplegic homolog. (467 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000009749	LOC103471035	ENSPREP00000009749	ENSPREP00000005305	MH1 domain-containing protein.	Mothers against decapentaplegic homolog.	0.414
ENSPREP00000009749	LOC103473773	ENSPREP00000009749	ENSPREP00000020499	MH1 domain-containing protein.	Mothers against decapentaplegic homolog.	0.724
ENSPREP00000009749	LOC103477474	ENSPREP00000009749	ENSPREP00000022544	MH1 domain-containing protein.	Mothers against decapentaplegic homolog.	0.724
ENSPREP00000009749	SMAD4	ENSPREP00000009749	ENSPREP00000027467	MH1 domain-containing protein.	Mothers against decapentaplegic homolog.	0.724
ENSPREP00000009749	smad1	ENSPREP00000009749	ENSPREP00000034328	MH1 domain-containing protein.	Mothers against decapentaplegic homolog.	0.417
ENSPREP00000009749	smad9	ENSPREP00000009749	ENSPREP00000017072	MH1 domain-containing protein.	Mothers against decapentaplegic homolog.	0.417
LOC103462100	LOC103471035	ENSPREP00000012140	ENSPREP00000005305	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.498
LOC103462100	LOC103473773	ENSPREP00000012140	ENSPREP00000020499	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.463
LOC103462100	LOC103477474	ENSPREP00000012140	ENSPREP00000022544	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.463
LOC103462100	SMAD4	ENSPREP00000012140	ENSPREP00000027467	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.463
LOC103462100	smad1	ENSPREP00000012140	ENSPREP00000034328	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.498
LOC103462100	smad9	ENSPREP00000012140	ENSPREP00000017072	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.498
LOC103466539	LOC103469777	ENSPREP00000015844	ENSPREP00000025545	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.901
LOC103466539	LOC103471035	ENSPREP00000015844	ENSPREP00000005305	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.413
LOC103466539	LOC103473773	ENSPREP00000015844	ENSPREP00000020499	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.971
LOC103466539	LOC103477474	ENSPREP00000015844	ENSPREP00000022544	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.971
LOC103466539	SMAD3	ENSPREP00000015844	ENSPREP00000012114	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.900
LOC103466539	SMAD4	ENSPREP00000015844	ENSPREP00000027467	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.736
LOC103466539	smad1	ENSPREP00000015844	ENSPREP00000034328	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.426
LOC103466539	smad6	ENSPREP00000015844	ENSPREP00000015813	Mothers against decapentaplegic homolog.	Mothers against decapentaplegic homolog.	0.947