(36 nodes) Chromo-like domain superfamily network (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC103469229	Chromobox homolog 4 (Pc class homolog, Drosophila). (555 aa)
	cbx6	Chromobox homolog 6a. (475 aa)
	LOC103472202	Chromobox homolog 3a (HP1 gamma homolog, Drosophila). (176 aa)
	LOC103478581	Chromobox homolog 3b. (187 aa)
	mphosph8	Chromo domain-containing protein. (1294 aa)
	LOC103472838	Chromodomain helicase DNA binding protein 4a. (1967 aa)
	cbx8	Chromobox homolog 8b. (381 aa)
	ENSPREP00000004299	Uncharacterized protein. (341 aa)
	chd1	Chromodomain helicase DNA binding protein 1. (1751 aa)
	LOC103469230	Chromobox homolog 8a (Pc class homolog, Drosophila). (343 aa)
	ENSPREP00000009577	Uncharacterized protein. (393 aa)
	chd9	Chromodomain helicase DNA binding protein 9. (3004 aa)
	CBX1	Uncharacterized protein. (241 aa)
	LOC103462110	MRG domain-containing protein. (280 aa)
	arid4b	Translocase of outer mitochondrial membrane 20. (1318 aa)
	suv39h1	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. (421 aa)
	MSL3	MSL complex subunit 3. (548 aa)
	cdyl	Chromodomain protein, Y-like. (502 aa)
	LOC103466532	Mortality factor 4 like 1. (315 aa)
	kat8	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (491 aa)
	chd3	Chromodomain helicase DNA binding protein 3. (1830 aa)
	chd4	Uncharacterized protein. (1981 aa)
	ENSPREP00000017598	Uncharacterized protein. (202 aa)
	cbx2	Chromobox homolog 2 (Drosophila Pc class). (526 aa)
	CBX1-2	Chromobox homolog 1b (HP1 beta homolog Drosophila). (199 aa)
	ENSPREP00000019416	Integrase catalytic domain-containing protein. (491 aa)
	CDYL2	Chromodomain Y like 2. (532 aa)
	chd5	Uncharacterized protein. (1804 aa)
	LOC103481889	Chromo domain-containing protein. (492 aa)
	ENSPREP00000026644	Chromo domain-containing protein. (60 aa)
	ENSPREP00000026973	Chromo domain-containing protein. (215 aa)
	cbx5	Chromobox homolog 5 (HP1 alpha homolog, Drosophila). (240 aa)
	LOC103482006	Chromobox homolog 7b. (277 aa)
	chd8	Chromodomain-helicase-DNA-binding protein 8; DNA helicase that acts as a chromatin remodeling factor and regulates transcription. Acts as a transcription repressor by remodeling chromatin structure and recruiting histone H1 to target genes. Suppresses p53/TP53-mediated apoptosis by recruiting histone H1 and preventing p53/TP53 transactivation activity. Acts as a negative regulator of Wnt signaling pathway by regulating beta-catenin (CTNNB1) activity. Negatively regulates CTNNB1-targeted gene expression by being recruited specifically to the promoter regions of several CTNNB1 responsive [...] (2620 aa)
	chd6	Chromodomain helicase DNA binding protein 6. (3390 aa)
	kat5	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (560 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBX1	LOC103472838	ENSPREP00000010096	ENSPREP00000001767	Uncharacterized protein.	Chromodomain helicase DNA binding protein 4a.	0.536
CBX1	chd3	ENSPREP00000010096	ENSPREP00000016390	Uncharacterized protein.	Chromodomain helicase DNA binding protein 3.	0.536
CBX1	chd4	ENSPREP00000010096	ENSPREP00000016795	Uncharacterized protein.	Uncharacterized protein.	0.649
CBX1	chd5	ENSPREP00000010096	ENSPREP00000021169	Uncharacterized protein.	Uncharacterized protein.	0.536
CBX1	suv39h1	ENSPREP00000010096	ENSPREP00000012183	Uncharacterized protein.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	0.851
CBX1-2	LOC103472838	ENSPREP00000019231	ENSPREP00000001767	Chromobox homolog 1b (HP1 beta homolog Drosophila).	Chromodomain helicase DNA binding protein 4a.	0.536
CBX1-2	chd3	ENSPREP00000019231	ENSPREP00000016390	Chromobox homolog 1b (HP1 beta homolog Drosophila).	Chromodomain helicase DNA binding protein 3.	0.536
CBX1-2	chd4	ENSPREP00000019231	ENSPREP00000016795	Chromobox homolog 1b (HP1 beta homolog Drosophila).	Uncharacterized protein.	0.649
CBX1-2	chd5	ENSPREP00000019231	ENSPREP00000021169	Chromobox homolog 1b (HP1 beta homolog Drosophila).	Uncharacterized protein.	0.536
CBX1-2	suv39h1	ENSPREP00000019231	ENSPREP00000012183	Chromobox homolog 1b (HP1 beta homolog Drosophila).	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	0.851
CDYL2	LOC103472838	ENSPREP00000019482	ENSPREP00000001767	Chromodomain Y like 2.	Chromodomain helicase DNA binding protein 4a.	0.435
CDYL2	cdyl	ENSPREP00000019482	ENSPREP00000013534	Chromodomain Y like 2.	Chromodomain protein, Y-like.	0.608
CDYL2	chd3	ENSPREP00000019482	ENSPREP00000016390	Chromodomain Y like 2.	Chromodomain helicase DNA binding protein 3.	0.435
CDYL2	chd4	ENSPREP00000019482	ENSPREP00000016795	Chromodomain Y like 2.	Uncharacterized protein.	0.435
CDYL2	chd5	ENSPREP00000019482	ENSPREP00000021169	Chromodomain Y like 2.	Uncharacterized protein.	0.435
CDYL2	suv39h1	ENSPREP00000019482	ENSPREP00000012183	Chromodomain Y like 2.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	0.696
ENSPREP00000009577	LOC103462110	ENSPREP00000009577	ENSPREP00000011728	Uncharacterized protein.	MRG domain-containing protein.	0.406
ENSPREP00000009577	LOC103466532	ENSPREP00000009577	ENSPREP00000016069	Uncharacterized protein.	Mortality factor 4 like 1.	0.406
ENSPREP00000009577	arid4b	ENSPREP00000009577	ENSPREP00000011747	Uncharacterized protein.	Translocase of outer mitochondrial membrane 20.	0.667
ENSPREP00000009577	mphosph8	ENSPREP00000009577	ENSPREP00000001684	Uncharacterized protein.	Chromo domain-containing protein.	0.465