(22 nodes) ClpP/crotonase-like domain superfamily network (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ECHDC3	Enoyl-CoA hydratase domain containing 3. (290 aa)
	LOC103482491	Zgc:101569; Belongs to the enoyl-CoA hydratase/isomerase family. (315 aa)
	ehhadh	Enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. (718 aa)
	eci2	Enoyl-CoA delta isomerase 2. (397 aa)
	clpp	ATP-dependent Clp protease proteolytic subunit. (270 aa)
	pccb	Propionyl-CoA carboxylase subunit beta. (561 aa)
	eci1	Enoyl-CoA delta isomerase 1; Belongs to the enoyl-CoA hydratase/isomerase family. (302 aa)
	ECHDC1	Ethylmalonyl-CoA decarboxylase 1. (163 aa)
	CDYL2	Chromodomain Y like 2. (532 aa)
	hadha	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b; Belongs to the enoyl-CoA hydratase/isomerase family. (757 aa)
	auh	AU RNA binding protein/enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (319 aa)
	echdc2	Enoyl CoA hydratase domain containing 2; Belongs to the enoyl-CoA hydratase/isomerase family. (332 aa)
	acaca	Acetyl-CoA carboxylase alpha. (2251 aa)
	hibch	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family. (382 aa)
	ech1	Enoyl CoA hydratase 1, peroxisomal; Belongs to the enoyl-CoA hydratase/isomerase family. (284 aa)
	cdyl	Chromodomain protein, Y-like. (502 aa)
	mccc2	Methylcrotonoyl-CoA carboxylase 2 (beta). (564 aa)
	LOC103463128	Si:ch211-198n5.11. (534 aa)
	acacb	Acetyl-CoA carboxylase beta. (2054 aa)
	echs1	Enoyl CoA hydratase, short chain, 1, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family. (291 aa)
	Rbp3	Interphotoreceptor retinoid-binding protein like. (910 aa)
	LOC103482020	Retinol binding protein 3. (617 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDYL2	LOC103463128	ENSPREP00000019482	ENSPREP00000033644	Chromodomain Y like 2.	Si:ch211-198n5.11.	0.526
CDYL2	LOC103482491	ENSPREP00000019482	ENSPREP00000025922	Chromodomain Y like 2.	Zgc:101569; Belongs to the enoyl-CoA hydratase/isomerase family.	0.527
CDYL2	acaca	ENSPREP00000019482	ENSPREP00000001848	Chromodomain Y like 2.	Acetyl-CoA carboxylase alpha.	0.480
CDYL2	acacb	ENSPREP00000019482	ENSPREP00000033271	Chromodomain Y like 2.	Acetyl-CoA carboxylase beta.	0.480
CDYL2	auh	ENSPREP00000019482	ENSPREP00000006396	Chromodomain Y like 2.	AU RNA binding protein/enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.426
CDYL2	cdyl	ENSPREP00000019482	ENSPREP00000013534	Chromodomain Y like 2.	Chromodomain protein, Y-like.	0.608
CDYL2	ech1	ENSPREP00000019482	ENSPREP00000030649	Chromodomain Y like 2.	Enoyl CoA hydratase 1, peroxisomal; Belongs to the enoyl-CoA hydratase/isomerase family.	0.744
CDYL2	echdc2	ENSPREP00000019482	ENSPREP00000003394	Chromodomain Y like 2.	Enoyl CoA hydratase domain containing 2; Belongs to the enoyl-CoA hydratase/isomerase family.	0.429
CDYL2	echs1	ENSPREP00000019482	ENSPREP00000031969	Chromodomain Y like 2.	Enoyl CoA hydratase, short chain, 1, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family.	0.429
CDYL2	eci1	ENSPREP00000019482	ENSPREP00000018663	Chromodomain Y like 2.	Enoyl-CoA delta isomerase 1; Belongs to the enoyl-CoA hydratase/isomerase family.	0.595
CDYL2	eci2	ENSPREP00000019482	ENSPREP00000014783	Chromodomain Y like 2.	Enoyl-CoA delta isomerase 2.	0.478
CDYL2	ehhadh	ENSPREP00000019482	ENSPREP00000013997	Chromodomain Y like 2.	Enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.451
CDYL2	hadha	ENSPREP00000019482	ENSPREP00000021058	Chromodomain Y like 2.	Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha b; Belongs to the enoyl-CoA hydratase/isomerase family.	0.451
CDYL2	hibch	ENSPREP00000019482	ENSPREP00000001228	Chromodomain Y like 2.	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.	0.553
CDYL2	mccc2	ENSPREP00000019482	ENSPREP00000013194	Chromodomain Y like 2.	Methylcrotonoyl-CoA carboxylase 2 (beta).	0.526
CDYL2	pccb	ENSPREP00000019482	ENSPREP00000017427	Chromodomain Y like 2.	Propionyl-CoA carboxylase subunit beta.	0.526
ECHDC1	LOC103463128	ENSPREP00000018980	ENSPREP00000033644	Ethylmalonyl-CoA decarboxylase 1.	Si:ch211-198n5.11.	0.542
ECHDC1	acaca	ENSPREP00000018980	ENSPREP00000001848	Ethylmalonyl-CoA decarboxylase 1.	Acetyl-CoA carboxylase alpha.	0.443
ECHDC1	acacb	ENSPREP00000018980	ENSPREP00000033271	Ethylmalonyl-CoA decarboxylase 1.	Acetyl-CoA carboxylase beta.	0.443
ECHDC1	ech1	ENSPREP00000018980	ENSPREP00000030649	Ethylmalonyl-CoA decarboxylase 1.	Enoyl CoA hydratase 1, peroxisomal; Belongs to the enoyl-CoA hydratase/isomerase family.	0.488