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nup93 nup93 nup188 nup188 rnps1 rnps1 thoc5 thoc5 nup85 nup85 nup98 nup98 cdc40 cdc40 LOC103464577 LOC103464577 srrm1 srrm1 NUP54 NUP54 alyref alyref srsf2 srsf2 nup160 nup160 gle1 gle1 SRSF3 SRSF3 slu7 slu7 NUP62 NUP62 srsf11 srsf11 eif4a3 eif4a3 NCBP1 NCBP1 srsf7 srsf7 aaas aaas nup50 nup50 thoc1 thoc1 nup37 nup37 nup153 nup153 nup210 nup210 tpr tpr SRSF11 SRSF11 LOC103474154 LOC103474154 LOC103457348 LOC103457348 seh1l seh1l ndc1 ndc1 casc3 casc3 Upf3b Upf3b ENSPREP00000018077 ENSPREP00000018077 thoc6 thoc6 LOC103474499 LOC103474499 LOC103473757 LOC103473757 magoh magoh LOC103461037 LOC103461037 DDX39A DDX39A nup155 nup155 ENSPREP00000021545 ENSPREP00000021545 LOC103479306 LOC103479306 thoc3 thoc3 nxf1 nxf1 sec13 sec13 LOC103469127 LOC103469127 nup43 nup43 nup58 nup58 nup88 nup88 poldip3 poldip3 nup214 nup214 rae1 rae1 LOC103475485 LOC103475485 LOC103476380 LOC103476380 ddx39a ddx39a rbm8a rbm8a thoc7 thoc7 ENSPREP00000028963 ENSPREP00000028963 Srek1 Srek1 ENSPREP00000029428 ENSPREP00000029428 LOC103465457 LOC103465457 chtop chtop ENSPREP00000030553 ENSPREP00000030553 Nup205 Nup205 ENSPREP00000030871 ENSPREP00000030871 nup35 nup35 nup42 nup42 ncbp2 ncbp2 thoc2 thoc2 nup133 nup133 ENSPREP00000032333 ENSPREP00000032333 LOC103459809 LOC103459809 dhx38 dhx38
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nup93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (822 aa)
nup188Nucleoporin 188. (1752 aa)
rnps1RNA binding protein S1, serine-rich domain. (280 aa)
thoc5THO complex 5. (683 aa)
nup85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (654 aa)
nup98Nucleoporin 98. (1820 aa)
cdc40Cell division cycle 40 homolog (S. cerevisiae). (581 aa)
LOC103464577RRM domain-containing protein. (160 aa)
srrm1Serine/arginine repetitive matrix 1. (839 aa)
NUP54Nucleoporin 54. (621 aa)
alyrefRRM domain-containing protein. (247 aa)
srsf2Serine and arginine rich splicing factor 2a. (236 aa)
nup160Nucleoporin 160. (1398 aa)
gle1GLE1 RNA export mediator. (778 aa)
SRSF3Serine and arginine rich splicing factor 3. (125 aa)
slu7SLU7 homolog, splicing factor. (560 aa)
NUP62Nucleoporin 62. (553 aa)
srsf11Serine and arginine rich splicing factor 11. (459 aa)
eif4a3Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (406 aa)
NCBP1Nuclear cap binding protein subunit 1. (797 aa)
srsf7Serine and arginine rich splicing factor 7b. (236 aa)
aaasAchalasia, adrenocortical insufficiency, alacrimia. (518 aa)
nup50Nucleoporin 50. (447 aa)
thoc1THO complex 1. (654 aa)
nup37Nucleoporin 37. (347 aa)
nup153Nucleoporin 153. (1518 aa)
nup210Nucleoporin 210. (1869 aa)
tprTranslocated promoter region b, nuclear basket protein. (2383 aa)
SRSF11Serine and arginine rich splicing factor 11. (453 aa)
LOC103474154Serine and arginine rich splicing factor 1a. (251 aa)
LOC103457348Serine and arginine rich splicing factor 5b. (301 aa)
seh1lSEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family. (357 aa)
ndc1NDC1 transmembrane nucleoporin. (669 aa)
casc3Casc3 exon junction complex subunit. (662 aa)
Upf3bUPF3B regulator of nonsense mediated mRNA decay. (149 aa)
ENSPREP00000018077Uncharacterized protein. (81 aa)
thoc6THO complex 6. (352 aa)
LOC103474499Uncharacterized protein. (228 aa)
LOC103473757Serine and arginine rich splicing factor 9. (251 aa)
magohMago homolog, exon junction complex subunit. (149 aa)
LOC103461037RAN binding protein 2. (2831 aa)
DDX39ADExD-box helicase 39A. (427 aa)
nup155Nucleoporin 155. (1373 aa)
ENSPREP00000021545Uncharacterized protein. (255 aa)
LOC103479306Translocated promoter region a, nuclear basket protein. (1861 aa)
thoc3THO complex 3. (349 aa)
nxf1Zgc:153681. (667 aa)
sec13SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (370 aa)
LOC103469127Aly/REF export factor. (270 aa)
nup43Nucleoporin 43. (344 aa)
nup58Nucleoporin 58. (601 aa)
nup88Nucleoporin 88. (720 aa)
poldip3Polymerase (DNA-directed), delta interacting protein 3. (494 aa)
nup214Nup214_FG domain-containing protein. (1849 aa)
rae1Ribonucleic acid export 1. (369 aa)
LOC103475485Uncharacterized protein. (248 aa)
LOC103476380POM121 transmembrane nucleoporin. (1114 aa)
ddx39aUncharacterized protein. (427 aa)
rbm8aRNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (160 aa)
thoc7THO complex 7. (203 aa)
ENSPREP00000028963SAP domain containing ribonucleoprotein. (222 aa)
Srek1Splicing regulatory glutamine/lysine-rich protein 1. (171 aa)
ENSPREP00000029428RRM domain-containing protein. (125 aa)
LOC103465457Zinc finger CCCH-type containing 11A. (833 aa)
chtopChromatin target of PRMT1a. (196 aa)
ENSPREP00000030553Serine and arginine rich splicing factor 7a. (149 aa)
Nup205Uncharacterized protein. (371 aa)
ENSPREP00000030871Uncharacterized protein. (312 aa)
nup35Nucleoporin 35. (282 aa)
nup42Nucleoporin 42. (474 aa)
ncbp2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (194 aa)
thoc2THO complex 2. (1557 aa)
nup133Nucleoporin 133. (1135 aa)
ENSPREP00000032333Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (241 aa)
LOC103459809U2 small nuclear RNA auxiliary factor 1. (235 aa)
dhx38DEAH (Asp-Glu-Ala-His) box polypeptide 38. (1229 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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