(44 nodes) Peroxisomal lipid metabolism network (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Sugct	Succinyl-CoA:glutarate-CoA transferase. (255 aa)
	phyhd1	Phytanoyl-CoA dioxygenase domain containing 1. (264 aa)
	Acbd5	ACB domain-containing protein. (81 aa)
	LOC103482125	Acyl-CoA binding domain containing 4. (418 aa)
	hacl1	2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family. (568 aa)
	LOC103472917	Carnitine O-acetyltransferase b. (526 aa)
	LOC103478958	ACB domain-containing protein. (553 aa)
	acox3	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (692 aa)
	dpy19l3	Dpy-19 like C-mannosyltransferase 3. (801 aa)
	amacr	Alpha-methylacyl-CoA racemase. (382 aa)
	acaa1	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family. (419 aa)
	scp2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (572 aa)
	ilvbl	IlvB (bacterial acetolactate synthase)-like; Belongs to the TPP enzyme family. (625 aa)
	LOC103469214	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (315 aa)
	LOC103471184	Zgc:174917. (265 aa)
	ENSPREP00000011372	Carn_acyltransf domain-containing protein. (104 aa)
	ENSPREP00000011404	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (338 aa)
	LOC103475651	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (489 aa)
	ehhadh	Enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. (718 aa)
	dpy19l4	Uncharacterized protein. (534 aa)
	eci2	Enoyl-CoA delta isomerase 2. (397 aa)
	LOC103470626	Zgc:154046; Belongs to the carnitine/choline acetyltransferase family. (628 aa)
	nudt19	Nudix (nucleoside diphosphate linked moiety X)-type motif 19. (393 aa)
	LOC103460228	ATP-binding cassette, sub-family D (ALD), member 1. (785 aa)
	podn	Podocan. (587 aa)
	hsd17b4	Hydroxysteroid (17-beta) dehydrogenase 4. (737 aa)
	ENSPREP00000022956	AMP-binding domain-containing protein. (337 aa)
	ENSPREP00000022979	AMP-binding domain-containing protein. (293 aa)
	ENSPREP00000022995	AMP-binding domain-containing protein. (234 aa)
	ENSPREP00000023206	Uncharacterized protein. (77 aa)
	phyh	Phytanoyl-CoA 2-hydroxylase. (333 aa)
	crot	Carnitine O-octanoyltransferase. (668 aa)
	hsdl2	Hydroxysteroid dehydrogenase like 2. (490 aa)
	acot8	Acyl-CoA thioesterase 8. (321 aa)
	LOC103462053	Solute carrier family 27 member 2a. (615 aa)
	LOC103462052	Uncharacterized protein. (621 aa)
	hao2	Hydroxyacid oxidase 2 (long chain). (392 aa)
	LOC103479484	Uncharacterized protein. (437 aa)
	LOC103479485	Uncharacterized protein. (455 aa)
	acox1	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (661 aa)
	slc25a17	Solute carrier family 25 member 17; Belongs to the mitochondrial carrier (TC 2.A.29) family. (312 aa)
	mlycd	Malonyl-CoA decarboxylase. (503 aa)
	dpy19l1	Dpy-19-like 1, like (H. sapiens). (730 aa)
	pecr	Peroxisomal trans-2-enoyl-CoA reductase. (298 aa)

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Acbd5	ENSPREP00000023206	ENSPREP00000001554	ENSPREP00000023206	ACB domain-containing protein.	Uncharacterized protein.	0.407
Acbd5	LOC103460228	ENSPREP00000001554	ENSPREP00000018941	ACB domain-containing protein.	ATP-binding cassette, sub-family D (ALD), member 1.	0.542
Acbd5	LOC103469214	ENSPREP00000001554	ENSPREP00000009765	ACB domain-containing protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.461
Acbd5	LOC103475651	ENSPREP00000001554	ENSPREP00000012656	ACB domain-containing protein.	Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.	0.407
Acbd5	acaa1	ENSPREP00000001554	ENSPREP00000006361	ACB domain-containing protein.	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	0.556
Acbd5	acox1	ENSPREP00000001554	ENSPREP00000029304	ACB domain-containing protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.595
Acbd5	acox3	ENSPREP00000001554	ENSPREP00000004131	ACB domain-containing protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.577
Acbd5	scp2	ENSPREP00000001554	ENSPREP00000006966	ACB domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.448
Acbd5	slc25a17	ENSPREP00000001554	ENSPREP00000029342	ACB domain-containing protein.	Solute carrier family 25 member 17; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.461
ENSPREP00000011372	LOC103470626	ENSPREP00000011372	ENSPREP00000017433	Carn_acyltransf domain-containing protein.	Zgc:154046; Belongs to the carnitine/choline acetyltransferase family.	0.902
ENSPREP00000011372	acaa1	ENSPREP00000011372	ENSPREP00000006361	Carn_acyltransf domain-containing protein.	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	0.496
ENSPREP00000011372	acox1	ENSPREP00000011372	ENSPREP00000029304	Carn_acyltransf domain-containing protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.677
ENSPREP00000011372	acox3	ENSPREP00000011372	ENSPREP00000004131	Carn_acyltransf domain-containing protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.409
ENSPREP00000011372	eci2	ENSPREP00000011372	ENSPREP00000014783	Carn_acyltransf domain-containing protein.	Enoyl-CoA delta isomerase 2.	0.425
ENSPREP00000011372	hao2	ENSPREP00000011372	ENSPREP00000029010	Carn_acyltransf domain-containing protein.	Hydroxyacid oxidase 2 (long chain).	0.431
ENSPREP00000011372	hsd17b4	ENSPREP00000011372	ENSPREP00000021168	Carn_acyltransf domain-containing protein.	Hydroxysteroid (17-beta) dehydrogenase 4.	0.601
ENSPREP00000011372	hsdl2	ENSPREP00000011372	ENSPREP00000025733	Carn_acyltransf domain-containing protein.	Hydroxysteroid dehydrogenase like 2.	0.685
ENSPREP00000011372	scp2	ENSPREP00000011372	ENSPREP00000006966	Carn_acyltransf domain-containing protein.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.729
ENSPREP00000011404	acaa1	ENSPREP00000011404	ENSPREP00000006361	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.	Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.	0.496
ENSPREP00000011404	acox1	ENSPREP00000011404	ENSPREP00000029304	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.677