STRINGSTRING
LOC103461674 LOC103461674 ube2v2 ube2v2 LOC103462108 LOC103462108 ENSPREP00000009964 ENSPREP00000009964 ubb ubb LOC103471875 LOC103471875 LOC103474795 LOC103474795 LOC103458735 LOC103458735 rpa2 rpa2 ddb1 ddb1 xpa xpa gtf2h5 gtf2h5 ccnh ccnh cdk7 cdk7 sumo2 sumo2 parp2 parp2 parp1 parp1 ENSPREP00000001588 ENSPREP00000001588 ercc5 ercc5 rnf111 rnf111 meiob meiob vwa5b2 vwa5b2 ercc4 ercc4 LOC103467943 LOC103467943 ENSPREP00000024644 ENSPREP00000024644 usp45 usp45 ENSPREP00000024682 ENSPREP00000024682 RAD23B RAD23B bivm bivm ube2i ube2i rbx1 rbx1 chd1l chd1l LOC103466094 LOC103466094 LOC103468487 LOC103468487 ercc2 ercc2 gtf2h4 gtf2h4 gtf2h3 gtf2h3 ercc3 ercc3 cul4a cul4a mnat1 mnat1 ENSPREP00000022268 ENSPREP00000022268 sumo1 sumo1 LOC103473189 LOC103473189 cetn3 cetn3 kctd2 kctd2 gtf2h1 gtf2h1 xpc xpc rpa3 rpa3 Rad23a Rad23a rps27a rps27a LOC103470674 LOC103470674 ube2n ube2n cul4b cul4b ENSPREP00000017515 ENSPREP00000017515 ENSPREP00000017501 ENSPREP00000017501 uba52 uba52 ddb2 ddb2 LOC103466533 LOC103466533 ercc1 ercc1 LOC103474198 LOC103474198 RPA1 RPA1 parp3 parp3 wdr76 wdr76
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103461674Ubiquitin-like domain-containing protein. (161 aa)
ube2v2Ubiquitin-conjugating enzyme E2 variant 2. (149 aa)
LOC103462108Protein inhibitor of activated STAT, 1a. (658 aa)
ENSPREP00000009964Ubiquitin-like domain-containing protein. (95 aa)
ubbUncharacterized protein. (179 aa)
LOC103471875Centrin 4. (171 aa)
LOC103474795Uncharacterized protein. (762 aa)
LOC103458735Small ubiquitin-related modifier. (94 aa)
rpa2Replication protein A2. (256 aa)
ddb1Damage-specific DNA binding protein 1. (1102 aa)
xpaXeroderma pigmentosum, complementation group A. (275 aa)
gtf2h5General transcription factor IIH, polypeptide 5. (71 aa)
ccnhCyclin H; Belongs to the cyclin family. (319 aa)
cdk7Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily. (387 aa)
sumo2Small ubiquitin-related modifier. (95 aa)
parp2Poly [ADP-ribose] polymerase. (647 aa)
parp1Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1015 aa)
ENSPREP00000001588Ubiquitin-conjugating enzyme E2 variant 1. (146 aa)
ercc5Excision repair cross-complementation group 5. (980 aa)
rnf111Ring finger protein 111. (982 aa)
meiobMethionine sulfoxide reductase B1b. (464 aa)
vwa5b2Von Willebrand factor A domain containing 5B2. (1248 aa)
ercc4Excision repair cross-complementation group 4. (893 aa)
LOC103467943Small ubiquitin-related modifier. (96 aa)
ENSPREP00000024644Si:cabz01080528.1. (583 aa)
usp45Ubiquitin carboxyl-terminal hydrolase. (821 aa)
ENSPREP00000024682KxDL motif containing 1. (197 aa)
RAD23BRAD23 homolog B, nucleotide excision repair protein. (421 aa)
bivmBasic, immunoglobulin-like variable motif containing. (500 aa)
ube2iUbiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
rbx1Ring-box 1, E3 ubiquitin protein ligase. (108 aa)
chd1lChromodomain helicase DNA binding protein 1-like. (867 aa)
LOC103466094Ubiquitin conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (209 aa)
LOC103468487UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
ercc2Excision repair cross-complementation group 2. (655 aa)
gtf2h4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (434 aa)
gtf2h3General transcription factor IIH, polypeptide 3. (277 aa)
ercc3Excision repair cross-complementation group 3. (783 aa)
cul4aCullin 4A; Belongs to the cullin family. (591 aa)
mnat1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (311 aa)
ENSPREP00000022268VIT domain-containing protein. (173 aa)
sumo1Small ubiquitin like modifier 1. (205 aa)
LOC103473189Uncharacterized protein. (154 aa)
cetn3Uncharacterized protein. (198 aa)
kctd2Potassium channel tetramerization domain containing 2. (268 aa)
gtf2h1General transcription factor IIH, polypeptide 1. (550 aa)
xpcXeroderma pigmentosum, complementation group C. (852 aa)
rpa3Replication protein A3. (122 aa)
Rad23aUbiquitin-like domain-containing protein. (168 aa)
rps27aRibosomal protein S27a. (156 aa)
LOC103470674General transcription factor IIH subunit. (420 aa)
ube2nUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (153 aa)
cul4bCullin 4B; Belongs to the cullin family. (872 aa)
ENSPREP00000017515Uncharacterized protein. (289 aa)
ENSPREP00000017501Rad60-SLD domain-containing protein. (78 aa)
uba52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
ddb2Damage-specific DNA binding protein 2. (490 aa)
LOC103466533Protein inhibitor of activated STAT, 1b. (647 aa)
ercc1Excision repair cross-complementation group 1. (358 aa)
LOC103474198Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (537 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (674 aa)
parp3Poly [ADP-ribose] polymerase. (522 aa)
wdr76WD repeat-containing protein 76; Specifically binds 5-hydroxymethylcytosine (5hmC), suggesting that it acts as a specific reader of 5hmC. Belongs to the WD repeat DDB2/WDR76 family. (535 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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