STRINGSTRING
polr2j polr2j lrmda lrmda LOC103468401 LOC103468401 ENSPREP00000022980 ENSPREP00000022980 wbp11 wbp11 LOC103468180 LOC103468180 rbm17 rbm17 LOC103461154 LOC103461154 LOC103473752 LOC103473752 LOC103469127 LOC103469127 hnrnpm hnrnpm dhx34 dhx34 lsm2 lsm2 LOC103463934 LOC103463934 polr2g polr2g polr2f polr2f LOC103475485 LOC103475485 Prpf4 Prpf4 ybx1 ybx1 ppih ppih ENSPREP00000025430 ENSPREP00000025430 prpf3 prpf3 PTBP3 PTBP3 syncrip syncrip cwf19l2 cwf19l2 ccdc12 ccdc12 gtf2f2 gtf2f2 luc7l3 luc7l3 cherp cherp nktr nktr hnrnpl hnrnpl phf5a phf5a ENSPREP00000030553 ENSPREP00000030553 csdc2 csdc2 pcbp3 pcbp3 ppil4 ppil4 Hnrnpa1 Hnrnpa1 wdr25 wdr25 ENSPREP00000029432 ENSPREP00000029432 ENSPREP00000029428 ENSPREP00000029428 Srek1 Srek1 ncmap ncmap sf3b3 sf3b3 ncbp2 ncbp2 txnl4b txnl4b polr2d polr2d ENSPREP00000032354 ENSPREP00000032354 prpf8 prpf8 ENSPREP00000032360 ENSPREP00000032360 acin1 acin1 cwc15 cwc15 ENSPREP00000032376 ENSPREP00000032376 srrt srrt Snrpf Snrpf LOC103470856 LOC103470856 LOC103481307 LOC103481307 polr2l polr2l tprg1l tprg1l LOC103475826 LOC103475826 ENSPREP00000001364 ENSPREP00000001364 LOC103463156 LOC103463156 ENSPREP00000001027 ENSPREP00000001027 SART1 SART1 plrg1 plrg1 UBL5 UBL5 sf3b1 sf3b1 LOC103474478 LOC103474478 LOC103467437 LOC103467437 LOC103480693 LOC103480693 zrsr2 zrsr2 ENSPREP00000028262 ENSPREP00000028262 ENSPREP00000028243 ENSPREP00000028243 hnrnpk hnrnpk DDX5 DDX5 sf3b6 sf3b6 dnajc8 dnajc8 hnrnpr hnrnpr prkrip1 prkrip1 wbp4 wbp4 snrnp48 snrnp48 ppwd1 ppwd1 ccar1 ccar1 cwc27 cwc27 snw1 snw1 dhx35 dhx35 txnl4a txnl4a bud31 bud31 srsf5 srsf5 LOC103473264 LOC103473264 cirbp cirbp snrpe snrpe prpf6 prpf6 mfap1 mfap1 SUGP1 SUGP1 HNRNPUL1 HNRNPUL1 daw1 daw1 sf3a2 sf3a2 rbm8a rbm8a LOC103479458 LOC103479458 Luc7l Luc7l snrnp27 snrnp27 LOC103467510 LOC103467510 clg6hxorf56 clg6hxorf56 ENSPREP00000001423 ENSPREP00000001423 snrpa snrpa zmat2 zmat2 wdr53 wdr53 ppie ppie tfip11 tfip11 LOC103477144 LOC103477144 ppil1 ppil1 LOC103479538 LOC103479538 rnps1 rnps1 ralyl ralyl pdcd7 pdcd7 cdc40 cdc40 snrpa1 snrpa1 prpf19 prpf19 prpf4b prpf4b LOC103464577 LOC103464577 pqbp1 pqbp1 sf3b2 sf3b2 LOC103467951 LOC103467951 srrm1 srrm1 prpf38a prpf38a LOC103473466 LOC103473466 syf2 syf2 ENSPREP00000004346 ENSPREP00000004346 Rbmx2 Rbmx2 polr2c polr2c mtrex mtrex fam50a fam50a Ppig Ppig dhx16 dhx16 ik ik rbm22 rbm22 alyref alyref srsf2 srsf2 Cwc25 Cwc25 LOC103464543 LOC103464543 LOC103464535 LOC103464535 LOC103471243 LOC103471243 sf1 sf1 Snrpd2 Snrpd2 polr2i polr2i SRSF3 SRSF3 cwc22 cwc22 slu7 slu7 smu1 smu1 cdc5l cdc5l DHX15 DHX15 snrpb2 snrpb2 LOC103475989 LOC103475989 ppp1r8 ppp1r8 snrnp40 snrnp40 LOC103460651 LOC103460651 DDX41 DDX41 snrpg snrpg hnrnpa3 hnrnpa3 ddx46 ddx46 snrnp70 snrnp70 LSM8 LSM8 ppil3 ppil3 PUF60 PUF60 sde2 sde2 hnrnph1 hnrnph1 ENSPREP00000008610 ENSPREP00000008610 xab2 xab2 snip1 snip1 srsf11 srsf11 eif4a3 eif4a3 NCBP1 NCBP1 srsf7 srsf7 LOC103457646 LOC103457646 LOC103467637 LOC103467637 POLR2E POLR2E ENSPREP00000009721 ENSPREP00000009721 LOC103481567 LOC103481567 sap18 sap18 tm6sf2 tm6sf2 HNRNPLL HNRNPLL ddx23 ddx23 parpbp parpbp snrpd1 snrpd1 clg9h9orf78 clg9h9orf78 dqx1 dqx1 aqr aqr polr2h polr2h SMU1 SMU1 snrpd3 snrpd3 pnn pnn PCBP2 PCBP2 prpf31 prpf31 leng1 leng1 htatsf1 htatsf1 snrnp25 snrnp25 LOC103480306 LOC103480306 TCERG1 TCERG1 SRRM3 SRRM3 dhx33 dhx33 ENSPREP00000012190 ENSPREP00000012190 srsf10 srsf10 EFTUD2 EFTUD2 ENSPREP00000012415 ENSPREP00000012415 LOC103457395 LOC103457395 ENSPREP00000012814 ENSPREP00000012814 prpf40a prpf40a snrnp200 snrnp200 SRSF11 SRSF11 ZNF830 ZNF830 sf3b5 sf3b5 LOC103458235 LOC103458235 u2surp u2surp tra2b tra2b LOC103474154 LOC103474154 LOC103473063 LOC103473063 bcas2 bcas2 HNRNPH3 HNRNPH3 nsrp1 nsrp1 rnf113a rnf113a ddx42 ddx42 LOC108166297 LOC108166297 rnpc3 rnpc3 rbmx rbmx sf3a1 sf3a1 LOC103457348 LOC103457348 ENSPREP00000015735 ENSPREP00000015735 LOC103458447 LOC103458447 HNRNPA0 HNRNPA0 yju2 yju2 LOC103462782 LOC103462782 ctnnbl1 ctnnbl1 sf3b4 sf3b4 polr2b polr2b zcrb1 zcrb1 slirp slirp LOC103476186 LOC103476186 usp39 usp39 LOC103476760 LOC103476760 dhx8 dhx8 casc3 casc3 nkap nkap ppp1r10 ppp1r10 Upf3b Upf3b ENSPREP00000018077 ENSPREP00000018077 smndc1 smndc1 fam32a fam32a prcc prcc crnkl1 crnkl1 carhsp1 carhsp1 ptbp1 ptbp1 zmat5 zmat5 SNRPC SNRPC LOC103473757 LOC103473757 polr2a polr2a ppil2 ppil2 LOC103479278 LOC103479278 YBX2 YBX2 magoh magoh znf318 znf318 LOC103476259 LOC103476259 WDR70 WDR70 rbm41 rbm41 LOC103479799 LOC103479799 sf3a3 sf3a3 LOC103461004 LOC103461004 ENSPREP00000020943 ENSPREP00000020943 ptbp2 ptbp2 paxbp1 paxbp1 LOC103461136 LOC103461136 LOC103460347 LOC103460347 prpf18 prpf18
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
polr2jPolymerase (RNA) II (DNA directed) polypeptide J. (117 aa)
lrmdaLeucine rich melanocyte differentiation associated. (233 aa)
LOC103468401DEAD (Asp-Glu-Ala-Asp) box helicase 5; Belongs to the DEAD box helicase family. (636 aa)
ENSPREP00000022980Small nuclear ribonucleoprotein-associated protein. (217 aa)
wbp11WW domain binding protein 11. (696 aa)
LOC103468180Zgc:158803. (416 aa)
rbm17RNA binding motif protein 17. (419 aa)
LOC103461154RNA binding motif protein 7. (262 aa)
LOC103473752Uncharacterized protein. (306 aa)
LOC103469127Aly/REF export factor. (270 aa)
hnrnpmHeterogeneous nuclear ribonucleoprotein M. (723 aa)
dhx34DEAH (Asp-Glu-Ala-His) box polypeptide 34. (1137 aa)
lsm2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (93 aa)
LOC103463934Tumor protein p63 regulated 1. (254 aa)
polr2gPolymerase (RNA) II (DNA directed) polypeptide G-like. (172 aa)
polr2fPolymerase (RNA) II (DNA directed) polypeptide F. (98 aa)
LOC103475485Uncharacterized protein. (248 aa)
Prpf4WD_REPEATS_REGION domain-containing protein. (184 aa)
ybx1Y box binding protein 1. (299 aa)
ppihPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (177 aa)
ENSPREP00000025430BUD13 homolog. (482 aa)
prpf3PRP3 pre-mRNA processing factor 3 homolog (yeast). (691 aa)
PTBP3Polypyrimidine tract binding protein 3. (574 aa)
syncripSynaptotagmin binding, cytoplasmic RNA interacting protein, like. (551 aa)
cwf19l2CWF19 like cell cycle control factor 2. (774 aa)
ccdc12Coiled-coil domain containing 12. (202 aa)
gtf2f2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (312 aa)
luc7l3Uncharacterized protein. (438 aa)
cherpCalcium homeostasis endoplasmic reticulum protein. (903 aa)
nktrNatural killer cell triggering receptor. (1368 aa)
hnrnplHeterogeneous nuclear ribonucleoprotein L. (494 aa)
phf5aPHD finger protein 5A. (110 aa)
ENSPREP00000030553Serine and arginine rich splicing factor 7a. (149 aa)
csdc2Cold shock domain containing C2, RNA binding a. (157 aa)
pcbp3Uncharacterized protein. (313 aa)
ppil4Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (478 aa)
Hnrnpa1RRM domain-containing protein. (94 aa)
wdr25WD_REPEATS_REGION domain-containing protein. (228 aa)
ENSPREP00000029432Uncharacterized protein. (223 aa)
ENSPREP00000029428RRM domain-containing protein. (125 aa)
Srek1Splicing regulatory glutamine/lysine-rich protein 1. (171 aa)
ncmapUncharacterized protein. (129 aa)
sf3b3Splicing factor 3b, subunit 3. (1014 aa)
ncbp2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (194 aa)
txnl4bThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (149 aa)
polr2dPolymerase (RNA) II (DNA directed) polypeptide D. (104 aa)
ENSPREP00000032354Ig-like domain-containing protein. (184 aa)
prpf8Pre-mRNA processing factor 8. (2358 aa)
ENSPREP00000032360Ig-like domain-containing protein. (169 aa)
acin1Apoptotic chromatin condensation inducer 1a. (933 aa)
cwc15CWC15 spliceosome associated protein homolog. (238 aa)
ENSPREP00000032376SAP domain-containing protein. (558 aa)
srrtSerrate RNA effector molecule homolog (Arabidopsis). (878 aa)
SnrpfSmall nuclear ribonucleoprotein polypeptide F. (87 aa)
LOC103470856Uncharacterized protein. (540 aa)
LOC103481307Uncharacterized protein. (183 aa)
polr2lPolymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
tprg1lTumor protein p63 regulated 1-like. (282 aa)
LOC103475826Zgc:163098. (880 aa)
ENSPREP00000001364RRM domain-containing protein. (246 aa)
LOC103463156RRM domain-containing protein. (141 aa)
ENSPREP00000001027Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (467 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (756 aa)
plrg1Pleiotropic regulator 1. (510 aa)
UBL5Ubiquitin like 5. (73 aa)
sf3b1Splicing factor 3b, subunit 1. (1315 aa)
LOC103474478Leucine rich repeat containing 51. (194 aa)
LOC103467437RNA binding motif protein 10. (872 aa)
LOC103480693DEAH (Asp-Glu-Ala-His) box helicase 15. (729 aa)
zrsr2Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2. (587 aa)
ENSPREP00000028262SAP domain-containing protein. (64 aa)
ENSPREP00000028243B30.2/SPRY domain-containing protein. (247 aa)
hnrnpkHeterogeneous nuclear ribonucleoprotein K. (436 aa)
DDX5DEAD-box helicase 5; Belongs to the DEAD box helicase family. (636 aa)
sf3b6Splicing factor 3b, subunit 6. (231 aa)
dnajc8DnaJ (Hsp40) homolog, subfamily C, member 8. (250 aa)
hnrnprHeterogeneous nuclear ribonucleoprotein R. (620 aa)
prkrip1PRKR interacting protein 1. (191 aa)
wbp4Uncharacterized protein. (433 aa)
snrnp48Small nuclear ribonucleoprotein 48 (U11/U12). (342 aa)
ppwd1Peptidylprolyl isomerase domain and WD repeat containing 1. (632 aa)
ccar1Cell division cycle and apoptosis regulator 1. (1141 aa)
cwc27CWC27 spliceosome associated cyclophilin. (455 aa)
snw1SNW domain containing 1. (536 aa)
dhx35DEAH-box helicase 35. (699 aa)
txnl4aThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
bud31BUD31 homolog. (103 aa)
srsf5Serine and arginine rich splicing factor 5a. (317 aa)
LOC103473264Heterogeneous nuclear ribonucleoprotein D. (274 aa)
cirbpCold inducible RNA binding protein b. (212 aa)
snrpeSmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (92 aa)
prpf6PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae). (1016 aa)
mfap1Microfibril associated protein 1. (441 aa)
SUGP1SURP and G-patch domain containing 1. (642 aa)
HNRNPUL1Heterogeneous nuclear ribonucleoprotein U like 1. (743 aa)
daw1WD_REPEATS_REGION domain-containing protein. (415 aa)
sf3a2Splicing factor 3a, subunit 2. (294 aa)
rbm8aRNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (160 aa)
LOC103479458Uncharacterized protein. (851 aa)
Luc7lLUC7-like (S. cerevisiae). (243 aa)
snrnp27SNRNP27 domain-containing protein. (162 aa)
LOC103467510Uncharacterized protein. (420 aa)
clg6hxorf56Zgc:103697. (225 aa)
ENSPREP00000001423Serine and arginine rich splicing factor 6a. (149 aa)
snrpaSmall nuclear ribonucleoprotein polypeptide A. (273 aa)
zmat2Zinc finger, matrin-type 2. (204 aa)
wdr53WD repeat domain 53. (373 aa)
ppiePeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (301 aa)
tfip11Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family. (830 aa)
LOC103477144Zgc:110045. (428 aa)
ppil1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
LOC103479538RRM domain-containing protein. (297 aa)
rnps1RNA binding protein S1, serine-rich domain. (280 aa)
ralylRRM domain-containing protein. (284 aa)
pdcd7Programmed cell death 7. (513 aa)
cdc40Cell division cycle 40 homolog (S. cerevisiae). (581 aa)
snrpa1Small nuclear ribonucleoprotein polypeptide A. (254 aa)
prpf19Pre-mRNA processing factor 19. (458 aa)
prpf4bPre-mRNA processing factor 4Bb. (984 aa)
LOC103464577RRM domain-containing protein. (160 aa)
pqbp1Polyglutamine binding protein 1. (153 aa)
sf3b2Splicing factor 3b, subunit 2. (853 aa)
LOC103467951G patch domain and KOW motifs. (323 aa)
srrm1Serine/arginine repetitive matrix 1. (839 aa)
prpf38aPre-mRNA processing factor 38A. (324 aa)
LOC103473466Heterogeneous nuclear ribonucleoprotein K, like. (431 aa)
syf2SYF2 pre-mRNA-splicing factor. (238 aa)
ENSPREP00000004346Uncharacterized protein. (56 aa)
Rbmx2Uncharacterized protein. (221 aa)
polr2cPolymerase (RNA) II (DNA directed) polypeptide C. (273 aa)
mtrexMtr4 exosome RNA helicase. (1053 aa)
fam50aFamily with sequence similarity 50 member A. (362 aa)
PpigPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (187 aa)
dhx16DEAH (Asp-Glu-Ala-His) box polypeptide 16. (1052 aa)
ikIK cytokine. (492 aa)
rbm22RNA binding motif protein 22. (426 aa)
alyrefRRM domain-containing protein. (247 aa)
srsf2Serine and arginine rich splicing factor 2a. (236 aa)
Cwc25Cir_N domain-containing protein. (64 aa)
LOC103464543RNA binding motif protein 5. (854 aa)
LOC103464535RNA binding motif protein 6. (1336 aa)
LOC103471243Heterogeneous nuclear ribonucleoprotein A/Ba. (321 aa)
sf1Splicing factor 1. (676 aa)
Snrpd2Small nuclear ribonucleoprotein Sm D2. (115 aa)
polr2iDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
SRSF3Serine and arginine rich splicing factor 3. (125 aa)
cwc22CWC22 spliceosome associated protein homolog. (854 aa)
slu7SLU7 homolog, splicing factor. (560 aa)
smu1SMU1 DNA replication regulator and spliceosomal factor b. (511 aa)
cdc5lCDC5 cell division cycle 5-like (S. pombe). (809 aa)
DHX15DEAH-box helicase 15. (763 aa)
snrpb2Small nuclear ribonucleoprotein polypeptide B2. (243 aa)
LOC103475989Apoptotic chromatin condensation inducer 1b. (1189 aa)
ppp1r8Protein phosphatase 1, regulatory subunit 8b. (342 aa)
snrnp40Small nuclear ribonucleoprotein 40 (U5). (347 aa)
LOC103460651Cwf21 domain-containing protein. (965 aa)
DDX41DEAD-box helicase 41. (614 aa)
snrpgSmall nuclear ribonucleoprotein G. (76 aa)
hnrnpa3Heterogeneous nuclear ribonucleoprotein A3. (333 aa)
ddx46DEAD (Asp-Glu-Ala-Asp) box polypeptide 46. (1071 aa)
snrnp70Small nuclear ribonucleoprotein 70 (U1). (466 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (111 aa)
ppil3Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (158 aa)
PUF60Poly-U binding splicing factor b. (540 aa)
sde2Uncharacterized protein. (276 aa)
hnrnph1Heterogeneous nuclear ribonucleoprotein H1. (406 aa)
ENSPREP00000008610RRM domain-containing protein. (275 aa)
xab2XPA binding protein 2. (912 aa)
snip1Smad nuclear interacting protein. (363 aa)
srsf11Serine and arginine rich splicing factor 11. (459 aa)
eif4a3Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (406 aa)
NCBP1Nuclear cap binding protein subunit 1. (797 aa)
srsf7Serine and arginine rich splicing factor 7b. (236 aa)
LOC103457646Lin-28 homolog B (C. elegans). (209 aa)
LOC103467637Poly(rC) binding protein 2. (324 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
ENSPREP00000009721Uncharacterized protein. (95 aa)
LOC103481567DEAH (Asp-Glu-Ala-His) box polypeptide 32a. (737 aa)
sap18Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins. (153 aa)
tm6sf2Transmembrane 6 superfamily member 2. (385 aa)
HNRNPLLHeterogeneous nuclear ribonucleoprotein L like. (513 aa)
ddx23DEAD (Asp-Glu-Ala-Asp) box polypeptide 23. (805 aa)
parpbpPARP1 binding protein. (589 aa)
snrpd1Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (119 aa)
clg9h9orf78Zgc:103692. (293 aa)
dqx1DEAQ box RNA-dependent ATPase 1. (838 aa)
aqrAquarius intron-binding spliceosomal factor. (1325 aa)
polr2hDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
SMU1SMU1 DNA replication regulator and spliceosomal factor. (527 aa)
snrpd3Small nuclear ribonucleoprotein Sm D3. (122 aa)
pnnPinin, desmosome associated protein. (669 aa)
PCBP2Poly(rC) binding protein 2. (469 aa)
prpf31PRP31 pre-mRNA processing factor 31 homolog (yeast). (508 aa)
leng1Leukocyte receptor cluster (LRC) member 1. (273 aa)
htatsf1HIV-1 Tat specific factor 1. (444 aa)
snrnp25Small nuclear ribonucleoprotein 25. (180 aa)
LOC103480306RRM domain-containing protein. (363 aa)
TCERG1Transcription elongation regulator 1. (1056 aa)
SRRM3Serine/arginine repetitive matrix 3. (640 aa)
dhx33DEAH (Asp-Glu-Ala-His) box polypeptide 33. (682 aa)
ENSPREP00000012190G patch domain containing 1. (769 aa)
srsf10RRM domain-containing protein. (187 aa)
EFTUD2Elongation factor Tu GTP binding domain containing 2. (389 aa)
ENSPREP00000012415EFG_C domain-containing protein. (178 aa)
LOC103457395RNA binding motif protein 25b. (829 aa)
ENSPREP00000012814Uncharacterized protein. (74 aa)
prpf40aPRP40 pre-mRNA processing factor 40 homolog A. (883 aa)
snrnp200Small nuclear ribonucleoprotein 200 (U5). (2136 aa)
SRSF11Serine and arginine rich splicing factor 11. (453 aa)
ZNF830Zinc finger protein 830. (333 aa)
sf3b5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
LOC103458235RNA binding motif protein 25a. (859 aa)
u2surpU2 snRNP-associated SURP domain containing. (961 aa)
tra2bTransformer 2 beta homolog. (321 aa)
LOC103474154Serine and arginine rich splicing factor 1a. (251 aa)
LOC103473063Serine and arginine rich splicing factor 4. (352 aa)
bcas2BCAS2 pre-mRNA processing factor. (243 aa)
HNRNPH3Heterogeneous nuclear ribonucleoprotein H3. (400 aa)
nsrp1Nuclear speckle splicing regulatory protein 1. (477 aa)
rnf113aRing finger protein 113A. (323 aa)
ddx42DEAD (Asp-Glu-Ala-Asp) box helicase 42. (941 aa)
LOC108166297RRM domain-containing protein. (97 aa)
rnpc3RNA-binding region (RNP1, RRM) containing 3. (506 aa)
rbmxRNA binding motif protein X-linked. (383 aa)
sf3a1Splicing factor 3a, subunit 1. (786 aa)
LOC103457348Serine and arginine rich splicing factor 5b. (301 aa)
ENSPREP00000015735Uncharacterized protein. (302 aa)
LOC103458447Src homology 2 domain containing transforming protein D, a. (415 aa)
HNRNPA0Heterogeneous nuclear ribonucleoprotein A0. (211 aa)
yju2YJU2 splicing factor homolog. (344 aa)
LOC103462782GC-rich sequence DNA-binding factor 2. (843 aa)
ctnnbl1Catenin, beta like 1. (534 aa)
sf3b4Splicing factor 3b, subunit 4. (403 aa)
polr2bDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
zcrb1Zinc finger CCHC-type and RNA binding motif 1. (206 aa)
slirpSRA stem-loop interacting RNA binding protein. (100 aa)
LOC103476186RRM domain-containing protein. (516 aa)
usp39Ubiquitin specific peptidase 39. (495 aa)
LOC103476760DEAH (Asp-Glu-Ala-His) box polypeptide 32b. (738 aa)
dhx8DEAH (Asp-Glu-Ala-His) box polypeptide 8. (1258 aa)
casc3Casc3 exon junction complex subunit. (662 aa)
nkapNFKB activating protein. (406 aa)
ppp1r10Protein phosphatase 1, regulatory subunit 10. (805 aa)
Upf3bUPF3B regulator of nonsense mediated mRNA decay. (149 aa)
ENSPREP00000018077Uncharacterized protein. (81 aa)
smndc1Survival motor neuron domain containing 1. (238 aa)
fam32aFamily with sequence similarity 32 member A. (114 aa)
prccProline rich mitotic checkpoint control factor. (401 aa)
crnkl1Crooked neck pre-mRNA splicing factor 1. (749 aa)
carhsp1Calcium regulated heat stable protein 1. (158 aa)
ptbp1Polypyrimidine tract binding protein 1a. (577 aa)
zmat5Zinc finger, matrin-type 5. (175 aa)
SNRPCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (180 aa)
LOC103473757Serine and arginine rich splicing factor 9. (251 aa)
polr2aDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1966 aa)
ppil2Peptidylprolyl isomerase (cyclophilin)-like 2. (525 aa)
LOC103479278Cactin. (851 aa)
YBX2Y-box binding protein 2. (325 aa)
magohMago homolog, exon junction complex subunit. (149 aa)
znf318Uncharacterized protein. (1657 aa)
LOC103476259Uncharacterized protein. (311 aa)
WDR70WD repeat domain 70. (536 aa)
rbm41RNA binding motif protein 41. (440 aa)
LOC103479799RALY RNA binding protein like. (351 aa)
sf3a3Splicing factor 3a, subunit 3. (502 aa)
LOC103461004General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (267 aa)
ENSPREP00000020943ARS2 domain-containing protein. (199 aa)
ptbp2Polypyrimidine tract binding protein 2b. (523 aa)
paxbp1PAX3 and PAX7 binding protein 1. (909 aa)
LOC103461136Uncharacterized protein. (352 aa)
LOC103460347ISY1 splicing factor homolog. (235 aa)
prpf18PRP18 pre-mRNA processing factor 18 homolog (yeast). (341 aa)
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (32%) [HD]